RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 RAC2P15153 192 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 HIST1H1CP16403 213 aaKnown RBP6.99□□□□□ -1.29
LSM2-213ENST00000491421 TNFRSF1AP19438 455 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 KITLGP21583 273 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 RRM2P31350 389 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 ERFP50548 548 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 HLXQ14774 488 aaPredicted RBP6.99□□□□□ -1.29
LSM2-213ENST00000491421 MEP1BQ16820 701 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 SPRNQ5BIV9 151 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 DCAF12L2Q5VW00 463 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 Q6ZR03 302 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 ZDHHC21Q8IVQ6 265 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 DEFB107AQ8IZN7 70 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 OR6V1Q8N148 313 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 GJC3Q8NFK1 279 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 OR4K13Q8NH42 304 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 PTP4A1Q93096 173 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 APOBEC3DQ96AK3 386 aaPredicted RBP6.99□□□□□ -1.29
LSM2-213ENST00000491421 HAVCR1Q96D42 359 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 SAMD8Q96LT4 415 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 DCLRE1CQ96SD1 692 aaKnown RBP6.99□□□□□ -1.29
LSM2-213ENST00000491421 NMNAT3Q96T66 252 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 COQ7Q99807 217 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 HDHD2Q9H0R4 259 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 SRA1Q9HD15 236 aaKnown RBP6.99□□□□□ -1.29
LSM2-213ENST00000491421 IL1RAPQ9NPH3 570 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 RPRD1BQ9NQG5 326 aaKnown RBP6.99□□□□□ -1.29
LSM2-213ENST00000491421 TMEM106BQ9NUM4 274 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 PTTG3PQ9NZH4 202 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 NPTNQ9Y639 398 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 LHFPL6Q9Y693 200 aa6.99□□□□□ -1.29
LSM2-213ENST00000491421 LOC105371242A0A075B767 164 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 A0A0A6YYJ9 748 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 J3QLI3 93 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 SURF4O15260 269 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 IDH3BO43837 385 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 IGHV2-70P01814 119 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 SBK2P0C263 348 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 EPHA1P21709 976 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 GATA3P23771 443 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 GSSP48637 474 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 MNAT1P51948 309 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 HIST1H3AP68431 136 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 LCN2P80188 198 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 DBPQ10586 325 aaPredicted RBP6.98□□□□□ -1.29
LSM2-213ENST00000491421 COX10Q12887 443 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 TSPAN31Q12999 210 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 HNRNPA0Q13151 305 aaKnown RBP6.98□□□□□ -1.29
LSM2-213ENST00000491421 SLC36A3Q495N2 470 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 SPATS1Q496A3 300 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 HIST2H3PS2Q5TEC6 136 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 CORO6Q6QEF8 472 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 FBXW12Q6X9E4 464 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 ZNF620Q6ZNG0 422 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 C1orf229Q6ZS94 237 aaPredicted RBP6.98□□□□□ -1.29
LSM2-213ENST00000491421 HIST2H3AQ71DI3 136 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 C1QL2Q7Z5L3 287 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 PIGWQ7Z7B1 504 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 LINC00346Q8IVM7 164 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 OR5AS1Q8N127 324 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 KLHL36Q8N4N3 616 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 SPICQ8N5J4 248 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 ZNF283Q8N7M2 679 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 ATG16L2Q8NAA4 619 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 SDR9C7Q8NEX9 313 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 SLC26A10Q8NG04 563 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 OR52L1Q8NGH7 329 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 OR5L1Q8NGL2 311 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 OR2AJ1Q8NGZ0 328 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 GNPDA2Q8TDQ7 276 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 ST7LQ8TDW4 575 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 ZNF418Q8TF45 676 aaPredicted RBP6.98□□□□□ -1.29
LSM2-213ENST00000491421 ITLN1Q8WWA0 313 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 CDADC1Q9BWV3 514 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 TMPRSS13Q9BYE2 586 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 FN3KQ9H479 309 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 DCAF16Q9NXF7 216 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 IL19Q9UHD0 177 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 PCDHB10Q9UN67 800 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 B9D1Q9UPM9 204 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 PPP1R3CQ9UQK1 317 aa6.98□□□□□ -1.29
LSM2-213ENST00000491421 OR6C68A6NDL8 312 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 RGS9O75916 674 aaPredicted RBP6.97□□□□□ -1.29
LSM2-213ENST00000491421 KRT36O76013 467 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 VENTXO95231 258 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 AVPP01185 164 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 HLA-DQA2P01906 255 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 ATP6V1B2P21281 511 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 RBMXP38159 391 aaKnown RBP6.97□□□□□ -1.29
LSM2-213ENST00000491421 BTG1P62324 171 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.97□□□□□ -1.29
LSM2-213ENST00000491421 ECH1Q13011 328 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 ZMYND11Q15326 602 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 CLEC12AQ5QGZ9 265 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 SLC35F1Q5T1Q4 408 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 OR2T2Q6IF00 324 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 SLC18B1Q6NT16 456 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 RPL13AP3Q6NVV1 102 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 SLC27A4Q6P1M0 643 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 PGBD2Q6P3X8 592 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms