RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 OR13G1Q8NGZ3 307 aa16.62■□□□□ 0.25
SREBF1-216ENST00000490796 APOBEC3DQ96AK3 386 aaPredicted RBP16.62■□□□□ 0.25
SREBF1-216ENST00000490796 ZNF582Q96NG8 517 aaPredicted RBP16.62■□□□□ 0.25
SREBF1-216ENST00000490796 GPX7Q96SL4 187 aaPredicted RBP16.62■□□□□ 0.25
SREBF1-216ENST00000490796 ADA2Q9NZK5 511 aa16.62■□□□□ 0.25
SREBF1-216ENST00000490796 NDUFAF4Q9P032 175 aa16.62■□□□□ 0.25
SREBF1-216ENST00000490796 OR5V1Q9UGF6 321 aa16.62■□□□□ 0.25
SREBF1-216ENST00000490796 PPIAL4AQ9Y536 164 aa16.62■□□□□ 0.25
SREBF1-216ENST00000490796 TANC2Q9HCD6 1990 aa16.62■□□□□ 0.25
SREBF1-216ENST00000490796 DBHP09172 617 aa16.61■□□□□ 0.25
SREBF1-216ENST00000490796 SLC6A9P48067 706 aa16.61■□□□□ 0.25
SREBF1-216ENST00000490796 SRP9P49458 86 aaKnown RBP16.61■□□□□ 0.25
SREBF1-216ENST00000490796 SMIM11AP58511 58 aa16.61■□□□□ 0.25
SREBF1-216ENST00000490796 HNRNPA0Q13151 305 aaKnown RBP16.61■□□□□ 0.25
SREBF1-216ENST00000490796 ZMYND11Q15326 602 aa16.61■□□□□ 0.25
SREBF1-216ENST00000490796 CCDC92Q53HC0 331 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-216ENST00000490796 OR2T2Q6IF00 324 aa16.61■□□□□ 0.25
SREBF1-216ENST00000490796 C8orf82Q6P1X6 216 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-216ENST00000490796 SMARCD3Q6STE5 483 aa16.61■□□□□ 0.25
SREBF1-216ENST00000490796 OR52J3Q8NH60 311 aa16.61■□□□□ 0.25
SREBF1-216ENST00000490796 GPA33Q99795 319 aa16.61■□□□□ 0.25
SREBF1-216ENST00000490796 HDHD2Q9H0R4 259 aa16.61■□□□□ 0.25
SREBF1-216ENST00000490796 SPAG4Q9NPE6 437 aa16.61■□□□□ 0.25
SREBF1-216ENST00000490796 MMP26Q9NRE1 261 aa16.61■□□□□ 0.25
SREBF1-216ENST00000490796 NUP50Q9UKX7 468 aa16.61■□□□□ 0.25
SREBF1-216ENST00000490796 TRBV4-1A0A0J9YWV2 114 aa16.6■□□□□ 0.25
SREBF1-216ENST00000490796 DIRAS1O95057 198 aa16.6■□□□□ 0.25
SREBF1-216ENST00000490796 RENP00797 406 aa16.6■□□□□ 0.25
SREBF1-216ENST00000490796 MDH1P40925 334 aaKnown RBP16.6■□□□□ 0.25
SREBF1-216ENST00000490796 OMPP47874 163 aa16.6■□□□□ 0.25
SREBF1-216ENST00000490796 ERFP50548 548 aa16.6■□□□□ 0.25
SREBF1-216ENST00000490796 UBA52P62987 128 aaKnown RBP16.6■□□□□ 0.25
SREBF1-216ENST00000490796 ZNF154Q13106 437 aa16.6■□□□□ 0.25
SREBF1-216ENST00000490796 HLXQ14774 488 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-216ENST00000490796 FBXW12Q6X9E4 464 aa16.6■□□□□ 0.25
SREBF1-216ENST00000490796 PTCHD4Q6ZW05 846 aa16.6■□□□□ 0.25
SREBF1-216ENST00000490796 DEFB108BQ8NET1 73 aa16.6■□□□□ 0.25
SREBF1-216ENST00000490796 OR8G5Q8NG78 346 aa16.6■□□□□ 0.25
SREBF1-216ENST00000490796 OR10AD1Q8NGE0 317 aa16.6■□□□□ 0.25
SREBF1-216ENST00000490796 SGMS2Q8NHU3 365 aa16.6■□□□□ 0.25
SREBF1-216ENST00000490796 ERMAPQ96PL5 475 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-216ENST00000490796 COQ7Q99807 217 aa16.6■□□□□ 0.25
SREBF1-216ENST00000490796 HCAR1Q9BXC0 346 aa16.6■□□□□ 0.25
SREBF1-216ENST00000490796 GCM1Q9NP62 436 aa16.6■□□□□ 0.25
SREBF1-216ENST00000490796 ABCD2Q9UBJ2 740 aa16.6■□□□□ 0.25
SREBF1-216ENST00000490796 LRRC30A6NM36 301 aa16.59■□□□□ 0.25
SREBF1-216ENST00000490796 TMEM178BH3BS89 294 aa16.59■□□□□ 0.25
SREBF1-216ENST00000490796 IMPA2O14732 288 aa16.59■□□□□ 0.25
SREBF1-216ENST00000490796 SPRY1O43609 319 aaPredicted RBP16.59■□□□□ 0.25
SREBF1-216ENST00000490796 PPP1R3DO95685 299 aa16.59■□□□□ 0.25
SREBF1-216ENST00000490796 FSHBP01225 129 aa16.59■□□□□ 0.25
SREBF1-216ENST00000490796 ZNF12P17014 697 aa16.59■□□□□ 0.25
SREBF1-216ENST00000490796 SLC6A6P31641 620 aa16.59■□□□□ 0.25
SREBF1-216ENST00000490796 CDKN2AP42771 156 aaKnown RBP16.59■□□□□ 0.25
SREBF1-216ENST00000490796 MMP16P51512 607 aa16.59■□□□□ 0.25
SREBF1-216ENST00000490796 KCNMB1Q16558 191 aa16.59■□□□□ 0.25
SREBF1-216ENST00000490796 LEG1Q6P5S2 330 aa16.59■□□□□ 0.25
SREBF1-216ENST00000490796 TSEN54Q7Z6J9 526 aaKnown RBP16.59■□□□□ 0.25
SREBF1-216ENST00000490796 SIGLECL1Q8N7X8 197 aa16.59■□□□□ 0.25
SREBF1-216ENST00000490796 ZDHHC22Q8N966 263 aa16.59■□□□□ 0.25
SREBF1-216ENST00000490796 FANK1Q8TC84 345 aa16.59■□□□□ 0.25
SREBF1-216ENST00000490796 CDADC1Q9BWV3 514 aa16.59■□□□□ 0.25
SREBF1-216ENST00000490796 SRA1Q9HD15 236 aaKnown RBP16.59■□□□□ 0.25
SREBF1-216ENST00000490796 ESM1Q9NQ30 184 aa16.59■□□□□ 0.25
SREBF1-216ENST00000490796 DCAF13Q9NV06 445 aaKnown RBP16.59■□□□□ 0.25
SREBF1-216ENST00000490796 LRCH1Q9Y2L9 728 aa16.59■□□□□ 0.25
SREBF1-216ENST00000490796 POLR3KQ9Y2Y1 108 aaPredicted RBP16.59■□□□□ 0.25
SREBF1-216ENST00000490796 INSIG2Q9Y5U4 225 aa16.59■□□□□ 0.25
SREBF1-216ENST00000490796 V9GYQ6 96 aa16.59■□□□□ 0.25
SREBF1-216ENST00000490796 TRAPPC2LH3BP13 241 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 GPANK1O95872 356 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 TXNDC12O95881 172 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 IRF2P14316 349 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 RPS2P15880 293 aaKnown RBP16.58■□□□□ 0.24
SREBF1-216ENST00000490796 SELEP16581 610 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 NOS3P29474 1203 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 SEC61A1P61619 476 aaKnown RBP16.58■□□□□ 0.24
SREBF1-216ENST00000490796 SPIBQ01892 262 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 SEC23BQ15437 767 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 MEP1BQ16820 701 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 SLC36A3Q495N2 470 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 CORO6Q6QEF8 472 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 BTNL3Q6UXE8 466 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 C1orf87Q8N0U7 546 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 BHLHE23Q8NDY6 225 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 OR2AJ1Q8NGZ0 328 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 DVL3Q92997 716 aaPredicted RBP16.58■□□□□ 0.24
SREBF1-216ENST00000490796 MCUR1Q96AQ8 359 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 MEGF10Q96KG7 1140 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 C7orf34Q96L11 122 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 TSSK2Q96PF2 358 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 SIGLEC11Q96RL6 698 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 PITX2Q99697 317 aa16.58■□□□□ 0.24
SREBF1-216ENST00000490796 CEACAM18A8MTB9 384 aa16.57■□□□□ 0.24
SREBF1-216ENST00000490796 A8MXK9 166 aa16.57■□□□□ 0.24
SREBF1-216ENST00000490796 GADD45GO95257 159 aa16.57■□□□□ 0.24
SREBF1-216ENST00000490796 CYB5R3P00387 301 aaPredicted RBP16.57■□□□□ 0.24
SREBF1-216ENST00000490796 HLA-DQA2P01906 255 aa16.57■□□□□ 0.24
SREBF1-216ENST00000490796 CPT2P23786 658 aa16.57■□□□□ 0.24
SREBF1-216ENST00000490796 RBMXP38159 391 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms