RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 KRT4P19013 534 aa11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 PRKAR1BP31321 381 aa11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 SERPINB5P36952 375 aa11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 GATA4P43694 442 aa11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 UGT2B15P54855 530 aa11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 ENDOGQ14249 297 aaKnown RBP11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 OR8B8Q15620 311 aa11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 MPPED2Q15777 294 aa11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 GTDC1Q4AE62 458 aa11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 NXNQ6DKJ4 435 aa11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 ZNF572Q7Z3I7 529 aaPredicted RBP11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 CLDN22Q8N7P3 220 aa11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 SLC7A6Q92536 515 aa11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 VPS33AQ96AX1 596 aa11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 ZNF582Q96NG8 517 aaPredicted RBP11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 DCTN5Q9BTE1 182 aa11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 RAB18Q9NP72 206 aa11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 PALMDQ9NP74 551 aa11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 A0A1W2PRG6 482 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 CENPBD1B2RD01 187 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 LGALS8O00214 317 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 KPNA4O00629 521 aaPredicted RBP11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 RFXANKO14593 260 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 ANGPTL7O43827 346 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 ECDO95905 644 aaPredicted RBP11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 HIST1H2ABP04908 130 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 CCDC159P0C7I6 412 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 ASAH2BP0C7U1 165 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 UMPSP11172 480 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 FAHP16930 419 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 FPR3P25089 353 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 HTR5AP47898 357 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 RGS8P57771 180 aaPredicted RBP11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 PCBD1P61457 104 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 CD47Q08722 323 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 POU4F2Q12837 409 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 KCNJ8Q15842 424 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 SLC25A47Q6Q0C1 308 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 LINC00114Q6XXX2 140 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 HIST3H2AQ7L7L0 130 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 Q8N7P7 452 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 SDR9C7Q8NEX9 313 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 BBS10Q8TAM1 723 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 HDAC2Q92769 488 aaKnown RBP11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 DPF1Q92782 380 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 HIST1H2ACQ93077 130 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 MAELQ96JY0 434 aaKnown RBP11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 FAM234AQ9H0X4 552 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 SMURF2Q9HAU4 748 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 TPT1P8Q9HAU6 139 aa11.11□□□□□ -0.63
EXOSC3-207ENST00000490516 A0A1B0GW55 424 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 FMO6PO60774 539 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 ZFPL1O95159 310 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 DUX4L2P0CJ85 424 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 DUX4L3P0CJ86 424 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 DUX4L4P0CJ87 422 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 DUX4L5P0CJ88 424 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 DUX4L6P0CJ89 424 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 DUX4L7P0CJ90 424 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 BMXP51813 675 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 RAD23AP54725 363 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 PRSS12P56730 875 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 CD83Q01151 205 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 RPL18Q07020 188 aaKnown RBP11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 LRRC75BQ2VPJ9 315 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 DHRS4L2Q6PKH6 230 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 DUX4L9Q6RFH8 374 aaPredicted RBP11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 FBXW12Q6X9E4 464 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 ADAMTSL5Q6ZMM2 481 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 NANOGNBQ7Z5D8 188 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 Q8N2B8 174 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 LY6G5BQ8NDX9 201 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 OR51G2Q8NGK0 314 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 TNFRSF14Q92956 283 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 ECSITQ9BQ95 431 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 WNT10AQ9GZT5 417 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 SLCO1B3Q9NPD5 702 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 RNF7Q9UBF6 113 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 DUX4Q9UBX2 424 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 ZNF229Q9UJW7 825 aa11.1□□□□□ -0.63
EXOSC3-207ENST00000490516 A0A1W2PPL8 197 aa11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 FBP2O00757 339 aa11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 DOK2O60496 412 aa11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 PEX14O75381 377 aa11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 SCG5P05408 212 aa11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 COX5BP10606 129 aa11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 ETS2P15036 469 aa11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 ARMC4Q5T2S8 1044 aa11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 SWT1Q5T5J6 900 aaKnown RBP11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 INTS11Q5TA45 600 aaKnown RBP11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 ZFAND6Q6FIF0 208 aa11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 TRMT10CQ7L0Y3 403 aaKnown RBP11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 SLC30A8Q8IWU4 369 aa11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 DTX3Q8N9I9 347 aa11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 Q8NFD4 153 aa11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 AJUBAQ96IF1 538 aa11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 COG8Q96MW5 612 aa11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 ZIM3Q96PE6 472 aa11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 TMEM100Q9NV29 134 aa11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 THUMPD1Q9NXG2 353 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms