RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 PTP4A1Q93096 173 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 TAMM41Q96BW9 452 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 SGTBQ96EQ0 304 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 CDADC1Q9BWV3 514 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 POLE4Q9NR33 117 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 C20orf141Q9NUB4 165 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 CCDC167Q9P0B6 97 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 CLN8Q9UBY8 286 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 ATPIF1Q9UII2 106 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 STARD10Q9Y365 291 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 USH1CQ9Y6N9 552 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 TET2Q6N021 2002 aaPredicted RBP6.81□□□□□ -1.32
USP39-216ENST00000490193 PLXNB1O43157 2135 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 CENPVL3A0A0U1RRI6 287 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 TMEM120BA0PK00 339 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 A6NIZ1 184 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 LRRC30A6NM36 301 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 ZNF879B4DU55 563 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 C22orf46C9J442 243 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 POLR3GO15318 223 aaPredicted RBP6.8□□□□□ -1.32
USP39-216ENST00000490193 SGCEO43556 437 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 DOK2O60496 412 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 OR5F1O95221 314 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 CYB5R3P00387 301 aaPredicted RBP6.8□□□□□ -1.32
USP39-216ENST00000490193 SCG5P05408 212 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 LIPFP07098 398 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 CFHR2P36980 270 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 GUCA1AP43080 201 aaPredicted RBP6.8□□□□□ -1.32
USP39-216ENST00000490193 GATA4P43694 442 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 HTR5AP47898 357 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 SRP9P49458 86 aaKnown RBP6.8□□□□□ -1.32
USP39-216ENST00000490193 RGS6P49758 472 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 NPY4RP50391 375 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 CRYBA2P53672 197 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 RAP1BP61224 184 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 RAP1AP62834 184 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 CYP51A1Q16850 503 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 ALG10Q5BKT4 473 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 TTMPQ5BVD1 217 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 INTS11Q5TA45 600 aaKnown RBP6.8□□□□□ -1.32
USP39-216ENST00000490193 RUSC1-AS1Q66K80 236 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 CCDC80Q76M96 950 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 CROCCP2Q86T23 111 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 CLDN22Q8N7P3 220 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 OR8G5Q8NG78 346 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 OR13G1Q8NGZ3 307 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 TMEM255BQ8WV15 326 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 GATAD2BQ8WXI9 593 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 TBX15Q96SF7 602 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 C16orf95Q9H693 158 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 KAT8Q9H7Z6 458 aaKnown RBP6.8□□□□□ -1.32
USP39-216ENST00000490193 TCF7L1Q9HCS4 588 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 TNFRSF19Q9NS68 423 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 ACOXLQ9NUZ1 547 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 KIF17Q9P2E2 1029 aa6.8□□□□□ -1.32
USP39-216ENST00000490193 IGHV1-69DA0A0B4J2H0 117 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 A0A1W2PPL8 197 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 OR6C6A6NF89 314 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 IQCF6A8MYZ5 107 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 H0YL77 283 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 MLNRO43193 412 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 ZNF205O95201 554 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 IGHV1-69P01742 117 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 SFTPBP07988 381 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 PMELP40967 661 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 IER3P46695 156 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 POU4F2Q12837 409 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 TOP3AQ13472 1001 aaPredicted RBP6.79□□□□□ -1.32
USP39-216ENST00000490193 AQP6Q13520 282 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 ANKDD1AQ495B1 522 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 SAMD5Q5TGI4 173 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 CD276Q5ZPR3 534 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 LYPD2Q6UXB3 125 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 GDPGP1Q6ZNW5 385 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 Q6ZPA2 131 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 Q6ZSV7 163 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 REC114Q7Z4M0 266 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 MOGAT3Q86VF5 341 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 DPP10Q8N608 796 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 CELF2-AS1Q8N7Q2 184 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 ATG16L2Q8NAA4 619 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 LRRC75AQ8NAA5 344 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 FAM156AQ8NDB6 213 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 OR10AD1Q8NGE0 317 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 Q8TCH9 128 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 SLC26A7Q8TE54 656 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 ERGIC1Q969X5 290 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 RASD2Q96D21 266 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 WDFY2Q96P53 400 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 CGREF1Q99674 301 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 PCGF1Q9BSM1 259 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 CCDC28BQ9BUN5 200 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 TRIM15Q9C019 465 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 CENPHQ9H3R5 247 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 RIMS3Q9UJD0 308 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 MED31Q9Y3C7 131 aa6.79□□□□□ -1.32
USP39-216ENST00000490193 PIN1P1O15428 100 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 AHCYL1O43865 530 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 TSPAN9O75954 239 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 TOX4O94842 621 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms