RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 ALX3O95076 343 aa11.6□□□□□ -0.55
VARS-227ENST00000489979 FSTL3O95633 263 aa11.6□□□□□ -0.55
VARS-227ENST00000489979 CFHR2P36980 270 aa11.6□□□□□ -0.55
VARS-227ENST00000489979 RPL15P61313 204 aaKnown RBP11.6□□□□□ -0.55
VARS-227ENST00000489979 LCN6P62502 163 aa11.6□□□□□ -0.55
VARS-227ENST00000489979 ZNF181Q2M3W8 571 aa11.6□□□□□ -0.55
VARS-227ENST00000489979 INTS11Q5TA45 600 aaKnown RBP11.6□□□□□ -0.55
VARS-227ENST00000489979 ZNF841Q6ZN19 808 aa11.6□□□□□ -0.55
VARS-227ENST00000489979 C1orf87Q8N0U7 546 aa11.6□□□□□ -0.55
VARS-227ENST00000489979 LRRC75AQ8NAA5 344 aa11.6□□□□□ -0.55
VARS-227ENST00000489979 OR10A6Q8NH74 314 aa11.6□□□□□ -0.55
VARS-227ENST00000489979 POLR2J2Q9GZM3 115 aaKnown RBP11.6□□□□□ -0.55
VARS-227ENST00000489979 POLR2J3Q9H1A7 115 aaKnown RBP11.6□□□□□ -0.55
VARS-227ENST00000489979 PTTG3PQ9NZH4 202 aa11.6□□□□□ -0.55
VARS-227ENST00000489979 KIF17Q9P2E2 1029 aa11.6□□□□□ -0.55
VARS-227ENST00000489979 KMT2CQ8NEZ4 4911 aaKnown RBP11.59□□□□□ -0.55
VARS-227ENST00000489979 CENPVL3A0A0U1RRI6 287 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 A6NIZ1 184 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 MLNRO43193 412 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 TOX4O94842 621 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 IGHV4-59P01825 116 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 IFI30P13284 250 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 RAP1BP61224 184 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 MAGOHP61326 146 aaKnown RBP11.59□□□□□ -0.55
VARS-227ENST00000489979 RAP1AP62834 184 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 OTPQ5XKR4 325 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 FBXW12Q6X9E4 464 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 DCDC5Q6ZRR9 648 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 CCDC80Q76M96 950 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 MICU2Q8IYU8 434 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 DPP10Q8N608 796 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 C19orf18Q8NEA5 215 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 GATAD2BQ8WXI9 593 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 BPIFA2Q96DR5 249 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 ZNF582Q96NG8 517 aaPredicted RBP11.59□□□□□ -0.55
VARS-227ENST00000489979 TBX15Q96SF7 602 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 PARD6BQ9BYG5 372 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 ACOXLQ9NUZ1 547 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 NDUFAF1Q9Y375 327 aa11.59□□□□□ -0.55
VARS-227ENST00000489979 TRAV27A0A087WT01 109 aa11.58□□□□□ -0.56
VARS-227ENST00000489979 OR6C6A6NF89 314 aa11.58□□□□□ -0.56
VARS-227ENST00000489979 ZNF879B4DU55 563 aa11.58□□□□□ -0.56
VARS-227ENST00000489979 FBP2O00757 339 aa11.58□□□□□ -0.56
VARS-227ENST00000489979 DBHP09172 617 aa11.58□□□□□ -0.56
VARS-227ENST00000489979 IRF2P14316 349 aa11.58□□□□□ -0.56
VARS-227ENST00000489979 MMP9P14780 707 aa11.58□□□□□ -0.56
VARS-227ENST00000489979 OR1E2P47887 323 aa11.58□□□□□ -0.56
VARS-227ENST00000489979 GZMMP51124 257 aa11.58□□□□□ -0.56
VARS-227ENST00000489979 VMACQ2NL98 169 aa11.58□□□□□ -0.56
VARS-227ENST00000489979 PCYOX1LQ8NBM8 494 aa11.58□□□□□ -0.56
VARS-227ENST00000489979 OR5L1Q8NGL2 311 aa11.58□□□□□ -0.56
VARS-227ENST00000489979 OR51A7Q8NH64 312 aa11.58□□□□□ -0.56
VARS-227ENST00000489979 OR1F12Q8NHA8 337 aa11.58□□□□□ -0.56
VARS-227ENST00000489979 C7orf26Q96N11 449 aa11.58□□□□□ -0.56
VARS-227ENST00000489979 TECTBQ96PL2 329 aa11.58□□□□□ -0.56
VARS-227ENST00000489979 BAG5Q9UL15 447 aa11.58□□□□□ -0.56
VARS-227ENST00000489979 TET2Q6N021 2002 aaPredicted RBP11.57□□□□□ -0.56
VARS-227ENST00000489979 IGHV1-69DA0A0B4J2H0 117 aa11.57□□□□□ -0.56
VARS-227ENST00000489979 ANGPT2O15123 496 aa11.57□□□□□ -0.56
VARS-227ENST00000489979 IGHV1-69P01742 117 aa11.57□□□□□ -0.56
VARS-227ENST00000489979 HLA-DPB1P04440 258 aa11.57□□□□□ -0.56
VARS-227ENST00000489979 PSMB10P40306 273 aa11.57□□□□□ -0.56
VARS-227ENST00000489979 RGS6P49758 472 aa11.57□□□□□ -0.56
VARS-227ENST00000489979 AQP6Q13520 282 aa11.57□□□□□ -0.56
VARS-227ENST00000489979 NFYCQ13952 458 aa11.57□□□□□ -0.56
VARS-227ENST00000489979 C2orf68Q2NKX9 166 aa11.57□□□□□ -0.56
VARS-227ENST00000489979 CCDC92Q53HC0 331 aaPredicted RBP11.57□□□□□ -0.56
VARS-227ENST00000489979 Q6ZSV7 163 aa11.57□□□□□ -0.56
VARS-227ENST00000489979 ZSCAN4Q8NAM6 433 aaPredicted RBP11.57□□□□□ -0.56
VARS-227ENST00000489979 BHLHE23Q8NDY6 225 aa11.57□□□□□ -0.56
VARS-227ENST00000489979 LRRC8CQ8TDW0 803 aa11.57□□□□□ -0.56
VARS-227ENST00000489979 RASD2Q96D21 266 aa11.57□□□□□ -0.56
VARS-227ENST00000489979 WDFY2Q96P53 400 aa11.57□□□□□ -0.56
VARS-227ENST00000489979 TRIM15Q9C019 465 aa11.57□□□□□ -0.56
VARS-227ENST00000489979 TMEM100Q9NV29 134 aa11.57□□□□□ -0.56
VARS-227ENST00000489979 TMCC3Q9ULS5 477 aa11.57□□□□□ -0.56
VARS-227ENST00000489979 NBEAL2Q6ZNJ1 2754 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 A0A0U1RQK1 487 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 IQCF6A8MYZ5 107 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 G3V4G9 280 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 J3QW42 95 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 CSF1P09603 554 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 CTLA4P16410 223 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 FUT4P22083 530 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 GATA4P43694 442 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 IER3P46695 156 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 NPY4RP50391 375 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 HOXA4Q00056 320 aaPredicted RBP11.56□□□□□ -0.56
VARS-227ENST00000489979 FHL1Q13642 323 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 BEAN1Q3B7T3 259 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 CD276Q5ZPR3 534 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 LDLRAD3Q86YD5 345 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 OR11L1Q8NGX0 322 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 LHX4Q969G2 390 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 MMADHCQ9H3L0 296 aaPredicted RBP11.56□□□□□ -0.56
VARS-227ENST00000489979 RABEP2Q9H5N1 569 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 ERVK-18Q9QC07 812 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 CTSZQ9UBR2 303 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 PLXNB1O43157 2135 aa11.56□□□□□ -0.56
VARS-227ENST00000489979 TEX13CA0A0J9YWL9 993 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms