RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 CEACAM3P40198 252 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 CEACAM6P40199 344 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 CCNG1P51959 295 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 ZNF136P52737 540 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 HADHBP55084 474 aaKnown RBP2.89□□□□□ -1.95
XRN1-213ENST00000489241 ZNF121P58317 390 aaPredicted RBP2.89□□□□□ -1.95
XRN1-213ENST00000489241 RCAN2Q14206 197 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 FBXO48Q5FWF7 155 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 PIGGQ5H8A4 983 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 MRPL55Q7Z7F7 128 aaKnown RBP2.89□□□□□ -1.95
XRN1-213ENST00000489241 HORMAD1Q86X24 394 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 FAM71AQ8IYT1 594 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 FAM58AQ8N1B3 248 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 FAM86B1Q8N7N1 296 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 Q8N7P7 452 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 LINC01555Q8NAE3 123 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 CHST4Q8NCG5 386 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 OR5AR1Q8NGP9 310 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 OR51E1Q8TCB6 317 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 SEH1LQ96EE3 360 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 NRBF2Q96F24 287 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 TMEM175Q9BSA9 504 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 HDHD3Q9BSH5 251 aaPredicted RBP2.89□□□□□ -1.95
XRN1-213ENST00000489241 CHID1Q9BWS9 393 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 CALN1Q9BXU9 219 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 STMN4Q9H169 189 aaPredicted RBP2.89□□□□□ -1.95
XRN1-213ENST00000489241 LINC00597Q9H2U6 94 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 MCUBQ9NWR8 336 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 IFNKQ9P0W0 207 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 ZNF282Q9UDV7 671 aaPredicted RBP2.89□□□□□ -1.95
XRN1-213ENST00000489241 STK38LQ9Y2H1 464 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 CACNG2Q9Y698 323 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 GAKO14976 1311 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 MEGF6O75095 1541 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 A6NDX4 124 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 H0Y9J4 135 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 H7C1H1 209 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 GMDSO60547 372 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 SS18L1O75177 396 aaPredicted RBP2.88□□□□□ -1.95
XRN1-213ENST00000489241 HPRT1P00492 218 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 HOXC4P09017 264 aaPredicted RBP2.88□□□□□ -1.95
XRN1-213ENST00000489241 GABRG2P18507 467 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 DRD3P35462 400 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 CSKP41240 450 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 RAB7AP51149 207 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 FABP6P51161 128 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 WNT4P56705 351 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 KRTAP10-8P60410 259 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 PRR3P79522 188 aaKnown RBP2.88□□□□□ -1.95
XRN1-213ENST00000489241 SLC39A6Q13433 755 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 STK38Q15208 465 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 QPRTQ15274 297 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 C5orf64Q2M2E5 130 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 GCSAMLQ5JQS6 135 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 TPRG1LQ5T0D9 272 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 THEM4Q5T1C6 240 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 PLET1Q6UQ28 207 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 WDR82Q6UXN9 313 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 FBXW12Q6X9E4 464 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 NCCRP1Q6ZVX7 275 aaPredicted RBP2.88□□□□□ -1.95
XRN1-213ENST00000489241 SLC35D2Q76EJ3 337 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 ZNF429Q86V71 674 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 SNX31Q8N9S9 440 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 Q8N9W7 124 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 C11orf72Q8NBR9 251 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 OR6Q1Q8NGQ2 317 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 OR13C9Q8NGT0 318 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 OR8K3Q8NH51 312 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 CIDECQ96AQ7 238 aaPredicted RBP2.88□□□□□ -1.95
XRN1-213ENST00000489241 ELSPBP1Q96BH3 223 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 C19orf60Q96EN9 201 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 GALNT14Q96FL9 552 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 CYYR1Q96J86 154 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 RNF145Q96MT1 663 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 LZTS2Q9BRK4 669 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 SLC25A2Q9BXI2 301 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 SLC39A1Q9NY26 324 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 FLVCR2Q9UPI3 526 aa2.88□□□□□ -1.95
XRN1-213ENST00000489241 PRG3Q9Y2Y8 225 aaPredicted RBP2.88□□□□□ -1.95
XRN1-213ENST00000489241 IGHV3-64DA0A0J9YX35 117 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 A0A1B0GUA9 196 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 GSTTP1A0A1W2PQM5 241 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 NKX2-6A6NCS4 301 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 H3BN98 237 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 H7C417 338 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 RDH16O75452 317 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 ETHE1O95571 254 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 CATP04040 527 aaKnown RBP2.87□□□□□ -1.95
XRN1-213ENST00000489241 PCCAP05165 728 aaPredicted RBP2.87□□□□□ -1.95
XRN1-213ENST00000489241 RETP07949 1114 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 PGA4P0DJD7 388 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 PGA3P0DJD8 388 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 PGA5P0DJD9 388 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 ERGP11308 486 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 HOXB8P17481 243 aaPredicted RBP2.87□□□□□ -1.95
XRN1-213ENST00000489241 WARSP23381 471 aaKnown RBP2.87□□□□□ -1.95
XRN1-213ENST00000489241 RPS10P46783 165 aaKnown RBP2.87□□□□□ -1.95
XRN1-213ENST00000489241 CYB561P49447 251 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 CLDN6P56747 220 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 HERVK_113P61574 105 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms