RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 MVKQ03426 396 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 PSG7Q13046 419 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 SCGB2A2Q13296 93 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 TRIM25Q14258 630 aaKnown RBP11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 CCDC92Q53HC0 331 aaPredicted RBP11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 TMEM255AQ5JRV8 349 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 AVPI1Q5T686 147 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 LCN8Q6JVE9 175 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 PGBD2Q6P3X8 592 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 DHFR2Q86XF0 187 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 TEX29Q8N6K0 151 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 OR4K13Q8NH42 304 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 CCL17Q92583 94 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 CCDC124Q96CT7 223 aaKnown RBP11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 CLPTM1LQ96KA5 538 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 SAMD8Q96LT4 415 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 TSSK2Q96PF2 358 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 NMNAT3Q96T66 252 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 ZNF665Q9H7R5 613 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 RPRD1BQ9NQG5 326 aaKnown RBP11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 HIF1ANQ9NWT6 349 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 TREM2Q9NZC2 230 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 KLHL21Q9UJP4 597 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 PURGQ9UJV8 347 aaKnown RBP11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 B9D1Q9UPM9 204 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 WIPI2Q9Y4P8 454 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 LYVE1Q9Y5Y7 322 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 CDH10Q9Y6N8 788 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 DYSFO75923 2080 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 FAM157AC9JC47 383 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 DCTN6O00399 190 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 WNT9BO14905 357 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 RER1O15258 196 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 SURF4O15260 269 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 TNFRSF1AP19438 455 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 HMGA2P52926 109 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 LMO4P61968 165 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 HIST1H3AP68431 136 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 TNFAIP6P98066 277 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 COX10Q12887 443 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 TRAP1Q12931 704 aaKnown RBP11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 CDK5R2Q13319 367 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 HIST2H3PS2Q5TEC6 136 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 ACSM5Q6NUN0 579 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 HIST2H3AQ71DI3 136 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 ZBTB46Q86UZ6 589 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 SDR9C7Q8NEX9 313 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 SLC26A10Q8NG04 563 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 PTP4A1Q93096 173 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 APOBEC3DQ96AK3 386 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 ASB9Q96DX5 294 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 CDADC1Q9BWV3 514 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 MSL2Q9HCI7 577 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 SRA1Q9HD15 236 aaKnown RBP11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 KCNG2Q9UJ96 466 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 LHFPL6Q9Y693 200 aa11.72□□□□□ -0.53
SPTLC1-207ENST00000488921 CCNB2O95067 398 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 GPANK1O95872 356 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 IGHV2-5P01817 119 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 HLA-DQA2P01906 255 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 RAC2P15153 192 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 ECH1Q13011 328 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 MEP1BQ16820 701 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 FAM98BQ52LJ0 330 aaKnown RBP11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 LIPNQ5VXI9 398 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 OTPQ5XKR4 325 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 SHQ1Q6PI26 577 aaKnown RBP11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 PHC2Q8IXK0 858 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 OR6V1Q8N148 313 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 RFLNBQ8N5W9 214 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 OR9Q2Q8NGE9 314 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 OR2AJ1Q8NGZ0 328 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 SLC7A6Q92536 515 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 HAVCR1Q96D42 359 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 CMBLQ96DG6 245 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 GAL3ST1Q99999 423 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 POFUT1Q9H488 388 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 LPAR2Q9HBW0 351 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 IL19Q9UHD0 177 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 STARD10Q9Y365 291 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 CACNG2Q9Y698 323 aa11.71□□□□□ -0.53
SPTLC1-207ENST00000488921 COL6A5A8TX70 2615 aa11.71□□□□□ -0.54
SPTLC1-207ENST00000488921 TCRBV5S2A0A599 114 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 ISPDA4D126 451 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 OR6C68A6NDL8 312 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 PNPP00491 289 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 DBHP09172 617 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 FLOT2Q14254 428 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 GK3PQ14409 553 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 CLEC12AQ5QGZ9 265 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 C1orf146Q5VVC0 180 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 SLC18B1Q6NT16 456 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 SLC27A4Q6P1M0 643 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 FBXW12Q6X9E4 464 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 RASSF6Q6ZTQ3 369 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 C10orf67Q8IYJ2 551 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 OR2Z1Q8NG97 314 aa11.7□□□□□ -0.54
SPTLC1-207ENST00000488921 OR52E2Q8NGJ4 325 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms