RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, humanhuman

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-215ENST00000488452 GLB1L2Q8IW92 636 aa12.7□□□□□ -0.38
NELFA-215ENST00000488452 ZNF420Q8TAQ5 688 aaPredicted RBP12.7□□□□□ -0.38
NELFA-215ENST00000488452 TAF15Q92804 592 aaKnown RBP eCLIP12.7□□□□□ -0.38
NELFA-215ENST00000488452 TMIGD2Q96BF3 282 aa12.7□□□□□ -0.38
NELFA-215ENST00000488452 RASD2Q96D21 266 aa12.7□□□□□ -0.38
NELFA-215ENST00000488452 NEIL1Q96FI4 390 aaPredicted RBP12.7□□□□□ -0.38
NELFA-215ENST00000488452 PLEKHA8Q96JA3 519 aa12.7□□□□□ -0.38
NELFA-215ENST00000488452 MEGF10Q96KG7 1140 aa12.7□□□□□ -0.38
NELFA-215ENST00000488452 ZNF570Q96NI8 536 aa12.7□□□□□ -0.38
NELFA-215ENST00000488452 TMEM120AQ9BXJ8 343 aa12.7□□□□□ -0.38
NELFA-215ENST00000488452 PTTG3PQ9NZH4 202 aa12.7□□□□□ -0.38
NELFA-215ENST00000488452 ASH2LQ9UBL3 628 aa12.7□□□□□ -0.38
NELFA-215ENST00000488452 COA3Q9Y2R0 106 aaPredicted RBP12.7□□□□□ -0.38
NELFA-215ENST00000488452 LOC100653049A0A140TA62 436 aa12.69□□□□□ -0.38
NELFA-215ENST00000488452 LRRC30A6NM36 301 aa12.69□□□□□ -0.38
NELFA-215ENST00000488452 CDC42EP2O14613 210 aa12.69□□□□□ -0.38
NELFA-215ENST00000488452 SLC16A7O60669 478 aa12.69□□□□□ -0.38
NELFA-215ENST00000488452 KHDRBS3O75525 346 aaKnown RBP12.69□□□□□ -0.38
NELFA-215ENST00000488452 KRT34O76011 436 aa12.69□□□□□ -0.38
NELFA-215ENST00000488452 FSTL3O95633 263 aa12.69□□□□□ -0.38
NELFA-215ENST00000488452 ZNF26P17031 533 aaPredicted RBP12.69□□□□□ -0.38
NELFA-215ENST00000488452 MDKP21741 143 aaPredicted RBP12.69□□□□□ -0.38
NELFA-215ENST00000488452 GPR4P46093 362 aa12.69□□□□□ -0.38
NELFA-215ENST00000488452 ZNF181Q2M3W8 571 aa12.69□□□□□ -0.38
NELFA-215ENST00000488452 OTPQ5XKR4 325 aa12.69□□□□□ -0.38
NELFA-215ENST00000488452 RRM2BQ7LG56 351 aa12.69□□□□□ -0.38
NELFA-215ENST00000488452 FAM122BQ7Z309 247 aa12.69□□□□□ -0.38
NELFA-215ENST00000488452 VTCN1Q7Z7D3 282 aa12.69□□□□□ -0.38
NELFA-215ENST00000488452 POU5F2Q8N7G0 328 aa12.69□□□□□ -0.38
NELFA-215ENST00000488452 OR10AD1Q8NGE0 317 aa12.69□□□□□ -0.38
NELFA-215ENST00000488452 DACT3Q96B18 629 aaPredicted RBP12.69□□□□□ -0.38
NELFA-215ENST00000488452 ZNF582Q96NG8 517 aaPredicted RBP12.69□□□□□ -0.38
NELFA-215ENST00000488452 TMEM246Q9BRR3 403 aa12.69□□□□□ -0.38
NELFA-215ENST00000488452 NDEL1Q9GZM8 345 aa12.69□□□□□ -0.38
NELFA-215ENST00000488452 RERGLQ9H628 205 aa12.69□□□□□ -0.38
NELFA-215ENST00000488452 NMNAT1Q9HAN9 279 aaPredicted RBP12.69□□□□□ -0.38
NELFA-215ENST00000488452 ATPIF1Q9UII2 106 aa12.69□□□□□ -0.38
NELFA-215ENST00000488452 MMP24Q9Y5R2 645 aa12.69□□□□□ -0.38
NELFA-215ENST00000488452 H0YL77 283 aa12.68□□□□□ -0.38
NELFA-215ENST00000488452 RER1O15258 196 aa12.68□□□□□ -0.38
NELFA-215ENST00000488452 PTP4A3O75365 173 aa12.68□□□□□ -0.38
NELFA-215ENST00000488452 DBHP09172 617 aa12.68□□□□□ -0.38
NELFA-215ENST00000488452 OMGP23515 440 aa12.68□□□□□ -0.38
NELFA-215ENST00000488452 KCNMB1Q16558 191 aa12.68□□□□□ -0.38
NELFA-215ENST00000488452 SPATC1Q76KD6 591 aa12.68□□□□□ -0.38
NELFA-215ENST00000488452 MOGAT3Q86VF5 341 aa12.68□□□□□ -0.38
NELFA-215ENST00000488452 C1orf87Q8N0U7 546 aa12.68□□□□□ -0.38
NELFA-215ENST00000488452 OR8B3Q8NGG8 313 aa12.68□□□□□ -0.38
NELFA-215ENST00000488452 APOBEC3DQ96AK3 386 aaPredicted RBP12.68□□□□□ -0.38
NELFA-215ENST00000488452 OR8B2Q96RD0 313 aa12.68□□□□□ -0.38
NELFA-215ENST00000488452 SLC30A2Q9BRI3 323 aa12.68□□□□□ -0.38
NELFA-215ENST00000488452 SYT4Q9H2B2 425 aa12.68□□□□□ -0.38
NELFA-215ENST00000488452 PRDM13Q9H4Q3 707 aa12.68□□□□□ -0.38
NELFA-215ENST00000488452 SAR1AQ9NR31 198 aa12.68□□□□□ -0.38
NELFA-215ENST00000488452 AP3M1Q9Y2T2 418 aa12.68□□□□□ -0.38
NELFA-215ENST00000488452 TRAV40A0A0B4J280 105 aa12.67□□□□□ -0.38
NELFA-215ENST00000488452 A0A1B0GUS0 222 aa12.67□□□□□ -0.38
NELFA-215ENST00000488452 MLNRO43193 412 aa12.67□□□□□ -0.38
NELFA-215ENST00000488452 HOXA3O43365 443 aaPredicted RBP12.67□□□□□ -0.38
NELFA-215ENST00000488452 NDUFB2O95178 105 aa12.67□□□□□ -0.38
NELFA-215ENST00000488452 ZNF682O95780 498 aa12.67□□□□□ -0.38
NELFA-215ENST00000488452 SDHAP31040 664 aa12.67□□□□□ -0.38
NELFA-215ENST00000488452 KRR1Q13601 381 aaKnown RBP12.67□□□□□ -0.38
NELFA-215ENST00000488452 ZNF404Q494X3 552 aa12.67□□□□□ -0.38
NELFA-215ENST00000488452 IFI44LQ53G44 452 aa12.67□□□□□ -0.38
NELFA-215ENST00000488452 GPR139Q6DWJ6 353 aa12.67□□□□□ -0.38
NELFA-215ENST00000488452 NLRC3Q7RTR2 1065 aa12.67□□□□□ -0.38
NELFA-215ENST00000488452 GJC3Q8NFK1 279 aa12.67□□□□□ -0.38
NELFA-215ENST00000488452 OR10S1Q8NGN2 331 aa12.67□□□□□ -0.38
NELFA-215ENST00000488452 ZDHHC16Q969W1 377 aa12.67□□□□□ -0.38
NELFA-215ENST00000488452 NUDT16L1Q9BRJ7 211 aaKnown RBP12.67□□□□□ -0.38
NELFA-215ENST00000488452 TMEM100Q9NV29 134 aa12.67□□□□□ -0.38
NELFA-215ENST00000488452 VSX1Q9NZR4 365 aaPredicted RBP12.67□□□□□ -0.38
NELFA-215ENST00000488452 TMEM5Q9Y2B1 443 aa12.67□□□□□ -0.38
NELFA-215ENST00000488452 IGHV3-64DA0A0J9YX35 117 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 MDFIC2A0A1B0GVS7 189 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 IQCF6A8MYZ5 107 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 F5H5P2 479 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 PMELP40967 661 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 PITPNBP48739 271 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 BPIFB3P59826 476 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 HIST1H3AP68431 136 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 OCLNQ16625 522 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 DEFB112Q30KQ8 113 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 FAM201AQ5SY85 155 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 ZNF362Q5T0B9 420 aaPredicted RBP12.66□□□□□ -0.38
NELFA-215ENST00000488452 HIST2H3PS2Q5TEC6 136 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 HIST2H3AQ71DI3 136 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 FKBP9P1Q75LS8 142 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 CBLL1Q75N03 491 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 FITM2Q8N6M3 262 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 COQ7Q99807 217 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 NUAK2Q9H093 628 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 ANKRD19PQ9H560 264 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 NRIP3Q9NQ35 241 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 CMTM6Q9NX76 183 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 GMPR2Q9P2T1 348 aaKnown RBP12.66□□□□□ -0.38
NELFA-215ENST00000488452 CLN8Q9UBY8 286 aa12.66□□□□□ -0.38
NELFA-215ENST00000488452 A0A1B0GWJ7 208 aa12.65□□□□□ -0.38
NELFA-215ENST00000488452 FAM181BA6NEQ2 426 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms