RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 RBMXL3Q8N7X1 1067 aaKnown RBP7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 OR6S1Q8NH40 331 aa7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 OR10J5Q8NHC4 309 aa7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 RPUSD4Q96CM3 377 aaKnown RBP7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 CASD1Q96PB1 797 aa7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 PLA2G12AQ9BZM1 189 aa7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 HCFC1R1Q9NWW0 138 aa7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 LHX6Q9UPM6 363 aa7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 PLCH1Q4KWH8 1693 aa7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 PLSCR5A0PG75 271 aa7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 RAB27BO00194 218 aa7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 SSSCA1O60232 199 aa7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 EIF4E2O60573 245 aaKnown RBP7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 LRP3O75074 770 aa7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 SMIM6P0DI80 62 aa7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 KCNJ3P48549 501 aa7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 NUDCD2Q8WVJ2 157 aa7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 MAST2Q6P0Q8 1798 aa7.54□□□□□ -1.2
MCF2L2-212ENST00000488149 TRAF3IP2O43734 574 aaPredicted RBP7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 C19orf57Q0VDD7 668 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 GUK1Q16774 197 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 IL22RA1Q8N6P7 574 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 KDF1Q8NAX2 398 aaPredicted RBP7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 GDE1Q9NZC3 331 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 LAMP3Q9UQV4 416 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 A0A1W2PPQ1 181 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 FABP4P15090 132 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 EIF1P41567 113 aaKnown RBP7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 AKR1C3P42330 323 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 AAED1Q7RTV5 226 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 LRRTM1Q86UE6 522 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 LIPHQ8WWY8 451 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 MS4A6EQ96DS6 147 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 KCNJ15Q99712 375 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 NRXN3Q9Y4C0 1643 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 ZIC2O95409 532 aaPredicted RBP7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 CT45A6P0DMU7 189 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 CT45A5P0DMU8 189 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 CT45A7P0DMV0 189 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 CT45A8P0DMV1 189 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 CT45A9P0DMV2 189 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 CYBAP13498 195 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 BMPR1AP36894 532 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 LIM2P55344 173 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 HSD17B7P56937 341 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 TPPP2P59282 170 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 CT45A2Q5DJT8 189 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 CT45A1Q5HYN5 189 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 ARIH2OSQ8N7S6 290 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 CT45A3Q8NHU0 189 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 LHFPL5Q8TAF8 219 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 CXorf58Q96LI9 332 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 TRAF4Q9BUZ4 470 aaPredicted RBP7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 SLC5A6Q9Y289 635 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 MMACHCQ9Y4U1 282 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 A0A087WV62 115 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 A0A1W2PR48 441 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 ANKRD61A6NGH8 418 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 CST4P01036 141 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 DRD1P21728 446 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 FOLR3P41439 243 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 SMUG1Q53HV7 270 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 ARRDC1Q8N5I2 433 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 OR4C5Q8NGB2 326 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 INTS12Q96CB8 462 aaKnown RBP7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 ZNF845Q96IR2 970 aaPredicted RBP7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 VAMP8Q9BV40 100 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 JAM3Q9BX67 310 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 PIAS3Q9Y6X2 628 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 CACNA1SQ13698 1873 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 ANKRD36CQ5JPF3 1778 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 MAT1AQ00266 395 aaKnown RBP7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 SSX1Q16384 188 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 TAS1R1Q7RTX1 841 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 ZDHHC22Q8N966 263 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 OR2G2Q8NGZ5 317 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 LYRM2Q9NU23 88 aaPredicted RBP7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 SPAG17Q6Q759 2223 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 ASPDHA6ND91 283 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 H3BQ06 376 aaPredicted RBP7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 SDCBPO00560 298 aaPredicted RBP7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 HIF1ANQ9NWT6 349 aa7.53□□□□□ -1.2
MCF2L2-212ENST00000488149 LINC00862A6NCI5 91 aa7.52□□□□□ -1.2
MCF2L2-212ENST00000488149 SLC6A1P30531 599 aa7.52□□□□□ -1.2
MCF2L2-212ENST00000488149 HNRNPA3P51991 378 aaKnown RBP7.52□□□□□ -1.2
MCF2L2-212ENST00000488149 YPEL5P62699 121 aa7.52□□□□□ -1.2
MCF2L2-212ENST00000488149 MORN1Q5T089 497 aa7.52□□□□□ -1.2
MCF2L2-212ENST00000488149 METRNLQ641Q3 311 aa7.52□□□□□ -1.2
MCF2L2-212ENST00000488149 DND1Q8IYX4 353 aaKnown RBP7.52□□□□□ -1.2
MCF2L2-212ENST00000488149 C19orf43Q9BQ61 176 aa7.52□□□□□ -1.2
MCF2L2-212ENST00000488149 SUCNR1Q9BXA5 334 aa7.52□□□□□ -1.2
MCF2L2-212ENST00000488149 SLC17A5Q9NRA2 495 aa7.52□□□□□ -1.2
MCF2L2-212ENST00000488149 SIRT5Q9NXA8 310 aa7.52□□□□□ -1.2
MCF2L2-212ENST00000488149 SLC17A2O00624 439 aa7.52□□□□□ -1.21
MCF2L2-212ENST00000488149 DSCR3O14972 297 aa7.52□□□□□ -1.21
MCF2L2-212ENST00000488149 MMP7P09237 267 aaPredicted RBP7.52□□□□□ -1.21
MCF2L2-212ENST00000488149 SLC17A1Q14916 467 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms