RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 PSMD4P55036 377 aaKnown RBP2.68□□□□□ -1.98
UBR3-211ENST00000487689 PLTPP55058 493 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 RIPK4P57078 832 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 OC90Q02509 493 aaPredicted RBP2.68□□□□□ -1.98
UBR3-211ENST00000487689 LRRC63Q05C16 580 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 ZNF33AQ06730 810 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 RAB40BQ12829 278 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 SRSF6Q13247 344 aaKnown RBP2.68□□□□□ -1.98
UBR3-211ENST00000487689 RAB35Q15286 201 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 CYTH1Q15438 398 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 TP53I3Q53FA7 332 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 PTRHD1Q6GMV3 140 aaKnown RBP2.68□□□□□ -1.98
UBR3-211ENST00000487689 OR52W1Q6IF63 320 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 ARMCX5Q6P1M9 558 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 CCDC137Q6PK04 289 aaKnown RBP2.68□□□□□ -1.98
UBR3-211ENST00000487689 SASS6Q6UVJ0 657 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 LRRC31Q6UY01 552 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 NDUFAF7Q7L592 441 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 MRPL21Q7Z2W9 205 aaKnown RBP2.68□□□□□ -1.98
UBR3-211ENST00000487689 APRG1Q8IVJ8 170 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 GPR65Q8IYL9 337 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 CMTM8Q8IZV2 173 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 C17orf78Q8N4C9 275 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 B3GNT7Q8NFL0 401 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 TSTD1Q8NFU3 115 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 OR4F17Q8NGA8 305 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 OR5L2Q8NGL0 311 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 OR4A15Q8NGL6 344 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 OR1K1Q8NGR3 316 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 OR4F5Q8NH21 305 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 CNIH3Q8TBE1 160 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 IL1F10Q8WWZ1 152 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 NAT6Q93015 286 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 STMN2Q93045 179 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 MRGPRFQ96AM1 343 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 CCDC124Q96CT7 223 aaKnown RBP2.68□□□□□ -1.98
UBR3-211ENST00000487689 PLEKHA8Q96JA3 519 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 ZNF641Q96N77 438 aaPredicted RBP2.68□□□□□ -1.98
UBR3-211ENST00000487689 ZNF317Q96PQ6 595 aaPredicted RBP2.68□□□□□ -1.98
UBR3-211ENST00000487689 CSPG4P5Q96PW8 444 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 ALKBH3Q96Q83 286 aaPredicted RBP2.68□□□□□ -1.98
UBR3-211ENST00000487689 OR4F4Q96R69 305 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 CNN2Q99439 309 aaKnown RBP2.68□□□□□ -1.98
UBR3-211ENST00000487689 DMAP1Q9NPF5 467 aaPredicted RBP2.68□□□□□ -1.98
UBR3-211ENST00000487689 ZNF302Q9NR11 478 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 INPP5EQ9NRR6 644 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 ZNF275Q9NSD4 429 aaPredicted RBP2.68□□□□□ -1.98
UBR3-211ENST00000487689 EIF3KQ9UBQ5 218 aaKnown RBP2.68□□□□□ -1.98
UBR3-211ENST00000487689 SCML2Q9UQR0 700 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 CBY1Q9Y3M2 126 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 OARD1Q9Y530 152 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 SAR1BQ9Y6B6 198 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 ABCA13Q86UQ4 5058 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 VWA8A3KMH1 1905 aa2.68□□□□□ -1.98
UBR3-211ENST00000487689 SHANK1Q9Y566 2161 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 ZFC3H1O60293 1989 aaKnown RBP2.67□□□□□ -1.98
UBR3-211ENST00000487689 TRBV9A0A0B4J1U6 114 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 TRBV7-9A0A0J9YWB2 115 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 IGLON5A6NGN9 336 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 RNF212BA8MTL3 300 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 E7EWF7 191 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 TEX46H3BTG2 121 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 M0R3G1 203 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 AIM2O14862 343 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 RAB29O14966 203 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 CCL16O15467 120 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 OR10H3O60404 316 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 ATP5LO75964 103 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 PDE5AO76074 875 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 JCHAINP01591 159 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 PIGRP01833 764 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 ZNF853P0CG23 659 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 CALML3P27482 149 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 SAA4P35542 130 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 CRATP43155 626 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 GNPDA1P46926 289 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 QARSP47897 775 aaKnown RBP2.67□□□□□ -1.98
UBR3-211ENST00000487689 CX3CR1P49238 355 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 ARRB1P49407 418 aaPredicted RBP2.67□□□□□ -1.98
UBR3-211ENST00000487689 ARHGDIAP52565 204 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 BTG1P62324 171 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 CSNK1G2P78368 415 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 MRPS15P82914 257 aaKnown RBP2.67□□□□□ -1.98
UBR3-211ENST00000487689 FASTKQ14296 549 aaKnown RBP2.67□□□□□ -1.98
UBR3-211ENST00000487689 MRPL23Q16540 153 aaKnown RBP2.67□□□□□ -1.98
UBR3-211ENST00000487689 PSG3Q16557 428 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 C18orf21Q32NC0 220 aaPredicted RBP2.67□□□□□ -1.98
UBR3-211ENST00000487689 REP15Q6BDI9 236 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 OR8G2PQ6IF36 304 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 C8orf74Q6P047 294 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 CERS6Q6ZMG9 384 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 BHLHA15Q7RTS1 189 aaPredicted RBP2.67□□□□□ -1.98
UBR3-211ENST00000487689 HDDC2Q7Z4H3 204 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 IFNEQ86WN2 208 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 NUDCD3Q8IVD9 361 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 ARHGAP18Q8N392 663 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 JAGN1Q8N5M9 183 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 INO80EQ8NBZ0 244 aaPredicted RBP2.67□□□□□ -1.98
UBR3-211ENST00000487689 FBXO36Q8NEA4 188 aa2.67□□□□□ -1.98
UBR3-211ENST00000487689 OR4F6Q8NGB9 312 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms