RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 HPCAP84074 193 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 DCTN2Q13561 401 aaKnown RBP4.64□□□□□ -1.67
COL4A3-206ENST00000487633 CASP8Q14790 479 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 OR8B8Q15620 311 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 DEFB136Q30KP8 78 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 GTDC1Q4AE62 458 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 C10orf128Q5T292 105 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 RNF220Q5VTB9 566 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 HHATQ5VTY9 493 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 SLC25A47Q6Q0C1 308 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 C16orf89Q6UX73 402 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 ZYG11AQ6WRX3 759 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 COLCA1Q6ZS62 124 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 NUDCD3Q8IVD9 361 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 SLC22A9Q8IVM8 553 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 C11orf42Q8N5U0 333 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 NOXO1Q8NFA2 376 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 OR5J2Q8NH18 312 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 Q8TCH9 128 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 MZB1Q8WU39 189 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 ISOC1Q96CN7 298 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 DMRTB1Q96MA1 342 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 SEPHS2Q99611 448 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 ECSITQ9BQ95 431 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 FUT8Q9BYC5 575 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 PPP1R3EQ9H7J1 279 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 SIAEQ9HAT2 523 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 EMC7Q9NPA0 242 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 CCNB1IP1Q9NPC3 277 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 ATAD3AQ9NVI7 634 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 CAB39Q9Y376 341 aaPredicted RBP4.64□□□□□ -1.67
COL4A3-206ENST00000487633 TMED5Q9Y3A6 229 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 SMAD5-AS1Q9Y6J3 95 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 DNAH6Q9C0G6 4158 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 TNCP24821 2201 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 DNAH17Q9UFH2 4485 aa4.64□□□□□ -1.67
COL4A3-206ENST00000487633 PKD1P98161 4303 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 A0A0B4J2E0 115 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 A0A1B0GX12 115 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 OOEPA6NGQ2 149 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 TRIM64CA6NLI5 447 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 RNASET2O00584 256 aaKnown RBP4.63□□□□□ -1.67
COL4A3-206ENST00000487633 SURF4O15260 269 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 PEX14O75381 377 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 LYPD3O95274 346 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 CH25HO95992 272 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 NR2F1P10589 423 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 UQCRBP14927 111 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 FAHP16930 419 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 FUT1P19526 365 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 MYF6P23409 242 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 FPR3P25089 353 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 IL12AP29459 219 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 SRP9P49458 86 aaKnown RBP4.63□□□□□ -1.67
COL4A3-206ENST00000487633 CEBPDP49716 269 aaPredicted RBP4.63□□□□□ -1.67
COL4A3-206ENST00000487633 CDH12P55289 794 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 CLDN8P56748 225 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 CLRN1P58418 232 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 GUCY1A3Q02108 690 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 GUCA2AQ02747 115 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 CKAP4Q07065 602 aaKnown RBP4.63□□□□□ -1.67
COL4A3-206ENST00000487633 CALCOCO2Q13137 446 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 IKZF1Q13422 519 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 RSPO1Q2MKA7 263 aaPredicted RBP4.63□□□□□ -1.67
COL4A3-206ENST00000487633 LIN52Q52LA3 116 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 ALG10BQ5I7T1 473 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 WDR38Q5JTN6 314 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 SPANXN4Q5MJ08 99 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 FAM27BQ5VT28 67 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 RNF165Q6ZSG1 346 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 NET1Q7Z628 596 aaPredicted RBP4.63□□□□□ -1.67
COL4A3-206ENST00000487633 WDR86Q86TI4 376 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 ZNF329Q86UD4 541 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 SNX32Q86XE0 403 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 C11orf53Q8IXP5 236 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 MKXQ8IYA7 352 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 PEX5LQ8IYB4 626 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 ZNF440Q8IYI8 595 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 LRRC34Q8IZ02 419 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 C10orf53Q8N6V4 93 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 OR5T2Q8NGG2 359 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 OR6S1Q8NH40 331 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 SLC38A5Q8WUX1 472 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 ASB10Q8WXI3 467 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 PTP4A1Q93096 173 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 MAL2Q969L2 176 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 VPS33AQ96AX1 596 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 TMEM19Q96HH6 336 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 RAX2Q96IS3 184 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 NABP2Q9BQ15 211 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 SPATA9Q9BWV2 254 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 PRSS22Q9GZN4 317 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 ELOVL3Q9HB03 270 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 RETNQ9HD89 108 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 ZDHHC18Q9NUE0 388 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 TBCCD1Q9NVR7 557 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 PRPF19Q9UMS4 504 aaKnown RBP4.63□□□□□ -1.67
COL4A3-206ENST00000487633 DSCAML1Q8TD84 2053 aa4.63□□□□□ -1.67
COL4A3-206ENST00000487633 IQCF6A8MYZ5 107 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 IMPA2O14732 288 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms