RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 SLC30A8Q8IWU4 369 aa12.72□□□□□ -0.37
MCF2L-228ENST00000487354 DPP10Q8N608 796 aa12.72□□□□□ -0.37
MCF2L-228ENST00000487354 ATG16L2Q8NAA4 619 aa12.72□□□□□ -0.37
MCF2L-228ENST00000487354 C19orf18Q8NEA5 215 aa12.72□□□□□ -0.37
MCF2L-228ENST00000487354 OR8G5Q8NG78 346 aa12.72□□□□□ -0.37
MCF2L-228ENST00000487354 FAM110DQ8TAY7 271 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-228ENST00000487354 PTP4A1Q93096 173 aa12.72□□□□□ -0.37
MCF2L-228ENST00000487354 RBP7Q96R05 134 aa12.72□□□□□ -0.37
MCF2L-228ENST00000487354 CGREF1Q99674 301 aa12.72□□□□□ -0.37
MCF2L-228ENST00000487354 SLC30A2Q9BRI3 323 aa12.72□□□□□ -0.37
MCF2L-228ENST00000487354 PCGF1Q9BSM1 259 aa12.72□□□□□ -0.37
MCF2L-228ENST00000487354 TCF7L1Q9HCS4 588 aa12.72□□□□□ -0.37
MCF2L-228ENST00000487354 RIMS3Q9UJD0 308 aa12.72□□□□□ -0.37
MCF2L-228ENST00000487354 ZNF879B4DU55 563 aa12.71□□□□□ -0.37
MCF2L-228ENST00000487354 SGCEO43556 437 aa12.71□□□□□ -0.37
MCF2L-228ENST00000487354 ENSAO43768 121 aaKnown RBP12.71□□□□□ -0.37
MCF2L-228ENST00000487354 ALX3O95076 343 aa12.71□□□□□ -0.37
MCF2L-228ENST00000487354 DBHP09172 617 aa12.71□□□□□ -0.37
MCF2L-228ENST00000487354 IER3P46695 156 aa12.71□□□□□ -0.37
MCF2L-228ENST00000487354 TAS2R41P59536 307 aa12.71□□□□□ -0.37
MCF2L-228ENST00000487354 CTXN1P60606 82 aa12.71□□□□□ -0.37
MCF2L-228ENST00000487354 SCRN3Q0VDG4 424 aa12.71□□□□□ -0.37
MCF2L-228ENST00000487354 CCDC92Q53HC0 331 aaPredicted RBP12.71□□□□□ -0.37
MCF2L-228ENST00000487354 CLEC12AQ5QGZ9 265 aa12.71□□□□□ -0.37
MCF2L-228ENST00000487354 C1orf94Q6P1W5 598 aa12.71□□□□□ -0.37
MCF2L-228ENST00000487354 DCDC5Q6ZRR9 648 aa12.71□□□□□ -0.37
MCF2L-228ENST00000487354 NLRC3Q7RTR2 1065 aa12.71□□□□□ -0.37
MCF2L-228ENST00000487354 ZSCAN4Q8NAM6 433 aaPredicted RBP12.71□□□□□ -0.37
MCF2L-228ENST00000487354 FNDC8Q8TC99 324 aa12.71□□□□□ -0.37
MCF2L-228ENST00000487354 C7orf26Q96N11 449 aa12.71□□□□□ -0.37
MCF2L-228ENST00000487354 CCDC28BQ9BUN5 200 aa12.71□□□□□ -0.37
MCF2L-228ENST00000487354 SIRPDQ9H106 197 aa12.71□□□□□ -0.37
MCF2L-228ENST00000487354 PTTG3PQ9NZH4 202 aa12.71□□□□□ -0.37
MCF2L-228ENST00000487354 TRAV27A0A087WT01 109 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 A0A0U1RQK1 487 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 P2RY10O00398 339 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 PRB2P02812 416 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-228ENST00000487354 ZNF26P17031 533 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-228ENST00000487354 GATA4P43694 442 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 SRP9P49458 86 aaKnown RBP12.7□□□□□ -0.38
MCF2L-228ENST00000487354 RAD23AP54725 363 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 PRSS12P56730 875 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 MAB21L1Q13394 359 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 VMACQ2NL98 169 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 MESTQ5EB52 335 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 SAMD5Q5TGI4 173 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 PCYOX1LQ8NBM8 494 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 OR13G1Q8NGZ3 307 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 OR10A6Q8NH74 314 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 Q8TCH9 128 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 WACQ9BTA9 647 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 POLR2J2Q9GZM3 115 aaKnown RBP12.7□□□□□ -0.38
MCF2L-228ENST00000487354 POLR2J3Q9H1A7 115 aaKnown RBP12.7□□□□□ -0.38
MCF2L-228ENST00000487354 C16orf95Q9H693 158 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 SMURF1Q9HCE7 757 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 ACOXLQ9NUZ1 547 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 TMCC3Q9ULS5 477 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 SH3GLB1Q9Y371 365 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 MED31Q9Y3C7 131 aa12.7□□□□□ -0.38
MCF2L-228ENST00000487354 IGHV1-69DA0A0B4J2H0 117 aa12.69□□□□□ -0.38
MCF2L-228ENST00000487354 IQCF6A8MYZ5 107 aa12.69□□□□□ -0.38
MCF2L-228ENST00000487354 J3QW42 95 aa12.69□□□□□ -0.38
MCF2L-228ENST00000487354 FBP2O00757 339 aa12.69□□□□□ -0.38
MCF2L-228ENST00000487354 IGHV1-69P01742 117 aa12.69□□□□□ -0.38
MCF2L-228ENST00000487354 HLA-DPB1P04440 258 aa12.69□□□□□ -0.38
MCF2L-228ENST00000487354 CTLA4P16410 223 aa12.69□□□□□ -0.38
MCF2L-228ENST00000487354 OR1E2P47887 323 aa12.69□□□□□ -0.38
MCF2L-228ENST00000487354 MICU2Q8IYU8 434 aa12.69□□□□□ -0.38
MCF2L-228ENST00000487354 PIP4P2Q8N4L2 257 aa12.69□□□□□ -0.38
MCF2L-228ENST00000487354 GATAD2BQ8WXI9 593 aa12.69□□□□□ -0.38
MCF2L-228ENST00000487354 TLCD1Q96CP7 247 aa12.69□□□□□ -0.38
MCF2L-228ENST00000487354 BPIFA2Q96DR5 249 aa12.69□□□□□ -0.38
MCF2L-228ENST00000487354 WDFY2Q96P53 400 aa12.69□□□□□ -0.38
MCF2L-228ENST00000487354 PARD6BQ9BYG5 372 aa12.69□□□□□ -0.38
MCF2L-228ENST00000487354 ADAM18Q9Y3Q7 739 aa12.69□□□□□ -0.38
MCF2L-228ENST00000487354 COL7A1Q02388 2944 aa12.69□□□□□ -0.38
MCF2L-228ENST00000487354 C5orf63A6NC05 138 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 A6NIZ1 184 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 IMPA2O14732 288 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 FAM20BO75063 409 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 TOX4O94842 621 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 IFI30P13284 250 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 RAP1BP61224 184 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 MAGOHP61326 146 aaKnown RBP12.68□□□□□ -0.38
MCF2L-228ENST00000487354 RAP1AP62834 184 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 AQP6Q13520 282 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 C2orf68Q2NKX9 166 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 INTS11Q5TA45 600 aaKnown RBP12.68□□□□□ -0.38
MCF2L-228ENST00000487354 CALHM3Q86XJ0 350 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 BHLHE23Q8NDY6 225 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 OR13C2Q8NGS9 318 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 OR1F12Q8NHA8 337 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 TBC1D15Q8TC07 691 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 SLC26A7Q8TE54 656 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 RASSF5Q8WWW0 418 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 RASD2Q96D21 266 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 MAGEB18Q96M61 343 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 COG8Q96MW5 612 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 A4GNTQ9UNA3 340 aa12.68□□□□□ -0.38
MCF2L-228ENST00000487354 TEX13CA0A0J9YWL9 993 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms