RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 GIPRP48546 466 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 ARHGDIAP52565 204 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 CXCR4P61073 352 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 ERVS71-1P61550 626 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 EMX1Q04741 257 aaPredicted RBP9.68□□□□□ -0.86
TRIM56-204ENST00000487252 PMS2P3Q13401 168 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 SCARB2Q14108 478 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 ZMYND11Q15326 602 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 MOGQ16653 247 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 IFI44LQ53G44 452 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 C11orf88Q6PI97 169 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 ZNF283Q8N7M2 679 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 SETD9Q8NE22 299 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 OR13F1Q8NGS4 319 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 MAL2Q969L2 176 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 TAMM41Q96BW9 452 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 MPP4Q96JB8 637 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 SIGLEC11Q96RL6 698 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 ZNF347Q96SE7 839 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 SSBP3Q9BWW4 388 aaPredicted RBP9.68□□□□□ -0.86
TRIM56-204ENST00000487252 ACTRT3Q9BYD9 372 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 REEP1Q9H902 201 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 A4GALTQ9NPC4 353 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 ACOXLQ9NUZ1 547 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 FBXL3Q9UKT7 428 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 SAMHD1Q9Y3Z3 626 aaKnown RBP9.68□□□□□ -0.86
TRIM56-204ENST00000487252 FRAS1Q86XX4 4008 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 CENPVL3A0A0U1RRI6 287 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 CEACAM18A8MTB9 384 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 FCMRO60667 390 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 MRPS14O60783 128 aaKnown RBP9.67□□□□□ -0.86
TRIM56-204ENST00000487252 IFNA14P01570 189 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 SERPINA5P05154 406 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 CD55P08174 381 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 HTR1AP08908 422 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 CD79AP11912 226 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 YAP1P46937 504 aaKnown RBP9.67□□□□□ -0.86
TRIM56-204ENST00000487252 POLR2HP52434 150 aaKnown RBP9.67□□□□□ -0.86
TRIM56-204ENST00000487252 FGF12P61328 243 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 BTG1P62324 171 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 RAB1AP62820 205 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 CDK6Q00534 326 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 PPP1R8Q12972 351 aaKnown RBP9.67□□□□□ -0.86
TRIM56-204ENST00000487252 RAB39AQ14964 217 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 OR7A5Q15622 319 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 MAPK14Q16539 360 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 DMRTC1Q5HYR2 192 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 TMEM255AQ5JRV8 349 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 NKAPLQ5M9Q1 402 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 XAF1Q6GPH4 301 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 DHRS4L2Q6PKH6 230 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 KCTD8Q6ZWB6 473 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 RNF130Q86XS8 419 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 PAQR4Q8N4S7 273 aaPredicted RBP9.67□□□□□ -0.86
TRIM56-204ENST00000487252 OR4F17Q8NGA8 305 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 NFKBIDQ8NI38 313 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 OIT3Q8WWZ8 545 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 C11orf40Q8WZ69 217 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 OR4F4Q96R69 305 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 DCLRE1CQ96SD1 692 aaKnown RBP9.67□□□□□ -0.86
TRIM56-204ENST00000487252 GABARAPL3Q9BY60 117 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 DPAGT1Q9H3H5 408 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 EXOSC3Q9NQT5 275 aaKnown RBP9.67□□□□□ -0.86
TRIM56-204ENST00000487252 ZCCHC3Q9NUD5 404 aaKnown RBP9.67□□□□□ -0.86
TRIM56-204ENST00000487252 TMEM106BQ9NUM4 274 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 THUMPD1Q9NXG2 353 aaKnown RBP9.67□□□□□ -0.86
TRIM56-204ENST00000487252 NDUFAF4Q9P032 175 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 BLOC1S6Q9UL45 172 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 NDRG4Q9ULP0 352 aaKnown RBP9.67□□□□□ -0.86
TRIM56-204ENST00000487252 ANGPT4Q9Y264 503 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 RASD1Q9Y272 281 aa9.67□□□□□ -0.86
TRIM56-204ENST00000487252 CCDC160A6NGH7 325 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 SLC1A7O00341 560 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 SPRY3O43610 288 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 MFN2O95140 757 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 CHRM4P08173 479 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 IL7RP16871 459 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 GABRA5P31644 462 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 CHI3L1P36222 383 aaPredicted RBP9.66□□□□□ -0.86
TRIM56-204ENST00000487252 IDH2P48735 452 aaKnown RBP9.66□□□□□ -0.86
TRIM56-204ENST00000487252 HMGA2P52926 109 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 DSTNP60981 165 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 DCTN2Q13561 401 aaKnown RBP9.66□□□□□ -0.86
TRIM56-204ENST00000487252 PHYHD1Q5SRE7 291 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 CLVS1Q8IUQ0 354 aaPredicted RBP9.66□□□□□ -0.86
TRIM56-204ENST00000487252 ARMC8Q8IUR7 673 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 SPARTQ8N0X7 666 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 GPR137CQ8N3F9 429 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 GATAD2BQ8WXI9 593 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 LZICQ8WZA0 190 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 ISOC1Q96CN7 298 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 TPD52L3Q96J77 140 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 MAP6Q96JE9 813 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 EGLN1Q9GZT9 426 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 DUSP21Q9H596 190 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 VPREB3Q9UKI3 123 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 SLC35A3Q9Y2D2 325 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 LYVE1Q9Y5Y7 322 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 U3KQV3 271 aa9.66□□□□□ -0.86
TRIM56-204ENST00000487252 ARRDC5A6NEK1 342 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms