RNA–Protein interactions for RNA: ENST00000487008.1

RAB17-211, Transcript of RAB17, member RAS oncogene family, human

TSL 3

Gene RAB17, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB17-211	ENST00000487008	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.66	□□□□□ -0.22
RAB17-211	ENST00000487008	ZNF525	Q8N782	197 aa		13.66	□□□□□ -0.22
RAB17-211	ENST00000487008	ZNF511	Q8NB15	262 aa		13.66	□□□□□ -0.22
RAB17-211	ENST00000487008	NEU4	Q8WWR8	484 aa	Predicted RBP	13.66	□□□□□ -0.22
RAB17-211	ENST00000487008	PTP4A1	Q93096	173 aa		13.66	□□□□□ -0.22
RAB17-211	ENST00000487008	MAP6	Q96JE9	813 aa		13.66	□□□□□ -0.22
RAB17-211	ENST00000487008	ATF6B	Q99941	703 aa		13.66	□□□□□ -0.22
RAB17-211	ENST00000487008	PKP2	Q99959	881 aa		13.66	□□□□□ -0.22
RAB17-211	ENST00000487008	PRRG3	Q9BZD7	231 aa		13.66	□□□□□ -0.22
RAB17-211	ENST00000487008	OR2J1	Q9GZK6	312 aa		13.66	□□□□□ -0.22
RAB17-211	ENST00000487008	WDR76	Q9H967	626 aa		13.66	□□□□□ -0.22
RAB17-211	ENST00000487008	PNRC2	Q9NPJ4	139 aa	Known RBP	13.66	□□□□□ -0.22
RAB17-211	ENST00000487008	TUBG2	Q9NRH3	451 aa		13.66	□□□□□ -0.22
RAB17-211	ENST00000487008	TAAR3P	Q9P1P4	343 aa		13.66	□□□□□ -0.22
RAB17-211	ENST00000487008	GRIP1	Q9Y3R0	1128 aa		13.66	□□□□□ -0.22
RAB17-211	ENST00000487008	SAC3D1	A6NKF1	404 aa		13.65	□□□□□ -0.22
RAB17-211	ENST00000487008		J3QW42	95 aa		13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	PRODH	O43272	600 aa		13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	GLCE	O94923	617 aa		13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	IGHV3-13	P01766	116 aa		13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	RPS27	P42677	84 aa	Known RBP	13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	RGS6	P49758	472 aa		13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	PPP2R2B	Q00005	443 aa		13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	KRTAP27-1	Q3LI81	207 aa		13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	TMEM154	Q6P9G4	183 aa		13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	CIART	Q8N365	385 aa	Predicted RBP	13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	KLF14	Q8TD94	323 aa	Predicted RBP	13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	SNX33	Q8WV41	574 aa		13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	COG8	Q96MW5	612 aa		13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	CIB1	Q99828	191 aa		13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	RHNO1	Q9BSD3	238 aa		13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	OR51V1	Q9H2C8	321 aa		13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	TPK1	Q9H3S4	243 aa		13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	HINT3	Q9NQE9	182 aa	Known RBP	13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	TVP23B	Q9NYZ1	205 aa		13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.65	□□□□□ -0.22
RAB17-211	ENST00000487008	ZNF593	O00488	134 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB17-211	ENST00000487008	MT-ND5	P03915	603 aa		13.64	□□□□□ -0.23
RAB17-211	ENST00000487008	INHBB	P09529	407 aa		13.64	□□□□□ -0.23
RAB17-211	ENST00000487008	NAT2	P11245	290 aa		13.64	□□□□□ -0.23
RAB17-211	ENST00000487008	PSKH1	P11801	424 aa		13.64	□□□□□ -0.23
RAB17-211	ENST00000487008	GSTT1	P30711	240 aa		13.64	□□□□□ -0.23
RAB17-211	ENST00000487008	MPV17	P39210	176 aa		13.64	□□□□□ -0.23
RAB17-211	ENST00000487008	SNAPC1	Q16533	368 aa		13.64	□□□□□ -0.23
RAB17-211	ENST00000487008	CXXC5	Q7LFL8	322 aa	Known RBP	13.64	□□□□□ -0.23
RAB17-211	ENST00000487008	DCXR	Q7Z4W1	244 aa		13.64	□□□□□ -0.23
RAB17-211	ENST00000487008	CPO	Q8IVL8	374 aa		13.64	□□□□□ -0.23
RAB17-211	ENST00000487008	FAM168A	Q92567	244 aa		13.64	□□□□□ -0.23
RAB17-211	ENST00000487008	APOBEC3D	Q96AK3	386 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB17-211	ENST00000487008	INTS14	Q96SY0	518 aa		13.64	□□□□□ -0.23
RAB17-211	ENST00000487008	RBM4B	Q9BQ04	359 aa	Known RBP	13.64	□□□□□ -0.23
RAB17-211	ENST00000487008	MARCH7	Q9H992	704 aa		13.64	□□□□□ -0.23
RAB17-211	ENST00000487008	DDX28	Q9NUL7	540 aa	Known RBP	13.64	□□□□□ -0.23
RAB17-211	ENST00000487008	IGHV4-30-2	A0A087WSY4	118 aa		13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	ZAR1L	A6NP61	321 aa		13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	RNF223	E7ERA6	249 aa		13.63	□□□□□ -0.23
RAB17-211	ENST00000487008		F5H5K5	113 aa		13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	EPHA2	P29317	976 aa		13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	PDLIM4	P50479	330 aa		13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	ALKBH6	Q3KRA9	238 aa		13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	KLHL12	Q53G59	568 aa		13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	SLC35D3	Q5M8T2	416 aa		13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	SLX4IP	Q5VYV7	408 aa		13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	BIVM	Q86UB2	503 aa		13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	ERI1	Q8IV48	349 aa	Known RBP	13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	OR5L1	Q8NGL2	311 aa		13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	OR10S1	Q8NGN2	331 aa		13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	C10orf105	Q8TEF2	133 aa		13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	SPTSSA	Q969W0	71 aa		13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	GABARAPL3	Q9BY60	117 aa		13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	REG4	Q9BYZ8	158 aa		13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	S100A14	Q9HCY8	104 aa		13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	CGGBP1	Q9UFW8	167 aa	Predicted RBP	13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	STARD10	Q9Y365	291 aa		13.63	□□□□□ -0.23
RAB17-211	ENST00000487008	LOC390937	A0A1W2PQ73	354 aa		13.62	□□□□□ -0.23
RAB17-211	ENST00000487008	PLSCR5	A0PG75	271 aa		13.62	□□□□□ -0.23
RAB17-211	ENST00000487008	C17orf100	A8MU93	164 aa		13.62	□□□□□ -0.23
RAB17-211	ENST00000487008	NDUFS8	O00217	210 aa		13.62	□□□□□ -0.23
RAB17-211	ENST00000487008	SMAD7	O15105	426 aa	Known RBP	13.62	□□□□□ -0.23
RAB17-211	ENST00000487008	ACSM4	P0C7M7	580 aa		13.62	□□□□□ -0.23
RAB17-211	ENST00000487008	DAO	P14920	347 aa		13.62	□□□□□ -0.23
RAB17-211	ENST00000487008	SLC25A16	P16260	332 aa		13.62	□□□□□ -0.23
RAB17-211	ENST00000487008	TMEM255A	Q5JRV8	349 aa		13.62	□□□□□ -0.23
RAB17-211	ENST00000487008	C12orf73	Q69YU5	71 aa		13.62	□□□□□ -0.23
RAB17-211	ENST00000487008	COLCA1	Q6ZS62	124 aa		13.62	□□□□□ -0.23
RAB17-211	ENST00000487008	TIGD4	Q8IY51	512 aa		13.62	□□□□□ -0.23
RAB17-211	ENST00000487008	BBS1	Q8NFJ9	593 aa		13.62	□□□□□ -0.23
RAB17-211	ENST00000487008	OR6N2	Q8NGY6	317 aa		13.62	□□□□□ -0.23
RAB17-211	ENST00000487008	ST7L	Q8TDW4	575 aa		13.62	□□□□□ -0.23
RAB17-211	ENST00000487008	SLAMF6	Q96DU3	332 aa		13.62	□□□□□ -0.23
RAB17-211	ENST00000487008	ZMYND19	Q96E35	227 aa	Predicted RBP	13.62	□□□□□ -0.23
RAB17-211	ENST00000487008	POFUT1	Q9H488	388 aa		13.62	□□□□□ -0.23
RAB17-211	ENST00000487008	CHD3	Q12873	2000 aa	Known RBP	13.62	□□□□□ -0.23
RAB17-211	ENST00000487008	ZNF878	C9JN71	531 aa		13.61	□□□□□ -0.23
RAB17-211	ENST00000487008		M0R135	149 aa		13.61	□□□□□ -0.23
RAB17-211	ENST00000487008	PRKY	O43930	277 aa		13.61	□□□□□ -0.23
RAB17-211	ENST00000487008	ALPL	P05186	524 aa		13.61	□□□□□ -0.23
RAB17-211	ENST00000487008	SLC2A5	P22732	501 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms