RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 STOMP27105 288 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 APEX1P27695 318 aaKnown RBP8.31□□□□□ -1.08
MCF2L-227ENST00000486806 DCTDP32321 178 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 PEX19P40855 299 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 IDH3GP51553 393 aaPredicted RBP8.31□□□□□ -1.08
MCF2L-227ENST00000486806 OR12D2P58182 307 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 PSMA6P60900 246 aaKnown RBP8.31□□□□□ -1.08
MCF2L-227ENST00000486806 GRB2P62993 217 aaKnown RBP8.31□□□□□ -1.08
MCF2L-227ENST00000486806 HGFACQ04756 655 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 ECH1Q13011 328 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 OR2G6Q5TZ20 316 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 SPATC1Q76KD6 591 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 ALDH16A1Q8IZ83 802 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 KLHL36Q8N4N3 616 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 NANOGP1Q8N7R0 232 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 SNX33Q8WV41 574 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 SLC7A6Q92536 515 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 PELI1Q96FA3 418 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 POM121L2Q96KW2 1035 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 C4orf36Q96KX1 117 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 MYCBPQ99417 103 aaPredicted RBP8.31□□□□□ -1.08
MCF2L-227ENST00000486806 DOK1Q99704 481 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 KCNJ15Q99712 375 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 MED18Q9BUE0 208 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 MND1Q9BWT6 205 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 MROQ9BYG7 248 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 CCDC90BQ9GZT6 254 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 ISG20L2Q9H9L3 353 aaKnown RBP8.31□□□□□ -1.08
MCF2L-227ENST00000486806 ELOVL3Q9HB03 270 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 ACOT13Q9NPJ3 140 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 CENPMQ9NSP4 180 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 ERGIC3Q9Y282 383 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 DOPEY1Q5JWR5 2465 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 A0A087WXM4 84 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 IQCMA0A1B0GVH7 501 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 MAGEA13PA6NCF6 341 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 M0R135 149 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 MYL12BO14950 172 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 MT-ND5P03915 603 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 KRT8P05787 483 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 H2BFMP0C1H6 154 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 ACSM4P0C7M7 580 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 EPXP11678 715 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 ANOS1P23352 680 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 MAP2K4P45985 399 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 MMP16P51512 607 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 RIDAP52758 137 aaKnown RBP8.3□□□□□ -1.08
MCF2L-227ENST00000486806 WNT4P56705 351 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 EMX1Q04741 257 aaPredicted RBP8.3□□□□□ -1.08
MCF2L-227ENST00000486806 PLP2Q04941 152 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 MFGE8Q08431 387 aaPredicted RBP8.3□□□□□ -1.08
MCF2L-227ENST00000486806 SNTB1Q13884 538 aaKnown RBP8.3□□□□□ -1.08
MCF2L-227ENST00000486806 TP53I3Q53FA7 332 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 LIPNQ5VXI9 398 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 XAF1Q6GPH4 301 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 TMPRSS11AQ6ZMR5 421 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 PLEKHG7Q6ZR37 379 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 PRSS45Q7RTY3 260 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 FAM220AQ7Z4H9 259 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 KCTD20Q7Z5Y7 419 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 KRT77Q7Z794 578 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 PAQR4Q8N4S7 273 aaPredicted RBP8.3□□□□□ -1.08
MCF2L-227ENST00000486806 SVOPQ8N4V2 548 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 SLC30A7Q8NEW0 376 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 TSPAN14Q8NG11 270 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 LINC01560Q8TB33 94 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 RPS4Y2Q8TD47 263 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 SPRYD4Q8WW59 207 aaPredicted RBP8.3□□□□□ -1.08
MCF2L-227ENST00000486806 RORBQ92753 470 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 MRPL48Q96GC5 212 aaKnown RBP8.3□□□□□ -1.08
MCF2L-227ENST00000486806 ZNF799Q96GE5 643 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 DACH2Q96NX9 599 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 OR5M11Q96RB7 305 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 NIPAL2Q9H841 368 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 FAM206AQ9NX38 181 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 CHCHD3Q9NX63 227 aaKnown RBP8.3□□□□□ -1.08
MCF2L-227ENST00000486806 NDRG3Q9UGV2 375 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 GNG8Q9UK08 70 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 IKZF2Q9UKS7 526 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 MYO7BQ6PIF6 2116 aa8.3□□□□□ -1.08
MCF2L-227ENST00000486806 USP9XQ93008 2570 aaPredicted RBP8.29□□□□□ -1.08
MCF2L-227ENST00000486806 IGHV2OR16-5A0A0B4J2B6 119 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 C5orf49A4QMS7 147 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 TUBAL3A6NHL2 446 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 E9PI62 339 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 J3QLW9 94 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 M0R1B8 84 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 SIAH2O43255 324 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 CLDN1O95832 211 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 PNPP00491 289 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 LALBAP00709 142 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 CCL2P13500 99 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 ZNF35P13682 527 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 ZNF19P17023 458 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 CD40P25942 277 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 HSD11B1P28845 292 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 CALCRP30988 508 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 APLNRP35414 380 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 WNT5AP41221 380 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 TGM4P49221 684 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms