RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 MRGPRFQ96AM1 343 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 PDXPQ96GD0 296 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 ZNF681Q96N22 645 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 ANKRD60Q9BZ19 345 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 LYRM4Q9HD34 91 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 PXMP2Q9NR77 195 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 CLN6Q9NWW5 311 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 ZNF222Q9UK12 451 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 UBN2Q6ZU65 1347 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 IGLV1-36A0A0B4J1U3 117 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 A0A1W2PRD5 423 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 TSPAN11A1L157 253 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 SYCE1LA8MT33 242 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 AQP8O94778 261 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 POLR2MP0CAP2 368 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 TLX1NBP0CAT3 122 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 ZNF823P16415 610 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 DTYMKP23919 212 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 IL32P24001 234 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 PFN3P60673 137 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 SEMG2Q02383 582 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 CHRFAM7AQ494W8 412 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 TFDP3Q5H9I0 405 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 FAM78AQ5JUQ0 283 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 PIP5KL1Q5T9C9 394 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 FAM71AQ8IYT1 594 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 GPX8Q8TED1 209 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 GLYATL2Q8WU03 294 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 DCPSQ96C86 337 aaKnown RBP2.86□□□□□ -1.95
SMC4-218ENST00000486711 OPALINQ96PE5 141 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 ZNF382Q96SR6 550 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 SPNS1Q9H2V7 528 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 SAV1Q9H4B6 383 aaPredicted RBP2.86□□□□□ -1.95
SMC4-218ENST00000486711 ZC4H2Q9NQZ6 224 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 HYOU1Q9Y4L1 999 aa2.86□□□□□ -1.95
SMC4-218ENST00000486711 MTCL1Q9Y4B5 1905 aaKnown RBP2.85□□□□□ -1.95
SMC4-218ENST00000486711 IGKV2D-24A0A075B6R9 120 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 A0A1B0GTQ1 180 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 A0A1B0GVX0 72 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 TMEM120BA0PK00 339 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 A6NDN8 102 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 K7EMT4 169 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 L7N2F9 121 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 B4GALT5O43286 388 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 RP2O75695 350 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 HPRT1P00492 218 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 IGKV3-11P04433 115 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 CTRB1P17538 263 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 PSMC3P17980 439 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 ATF6P18850 670 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 CSNK2A2P19784 350 aaPredicted RBP2.85□□□□□ -1.95
SMC4-218ENST00000486711 SSTR5P35346 364 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 RFC3P40938 356 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 RAB7AP51149 207 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 DNAJC3Q13217 504 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 SLAQ13239 276 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 RCAN2Q14206 197 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 C16orf72Q14CZ0 275 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 TRMT5Q32P41 509 aaKnown RBP2.85□□□□□ -1.95
SMC4-218ENST00000486711 NANOGP8Q6NSW7 305 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 CALHM1Q8IU99 346 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 APRG1Q8IVJ8 170 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 NPWQ8N729 165 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 C8orf31Q8N9H6 132 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 OR10G2Q8NGC3 310 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 OR2L8Q8NGY9 312 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 OR52E5Q8NH55 327 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 C9orf72Q96LT7 481 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 CAMK2N2Q96S95 79 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 TIMM17AQ99595 171 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 FOXC2Q99958 501 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 CALN1Q9BXU9 219 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 UBE2ZQ9H832 354 aaPredicted RBP2.85□□□□□ -1.95
SMC4-218ENST00000486711 EDA2RQ9HAV5 297 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 CRLF2Q9HC73 371 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 ACP6Q9NPH0 428 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 DDX19AQ9NUU7 478 aaKnown RBP2.85□□□□□ -1.95
SMC4-218ENST00000486711 SLC39A1Q9NY26 324 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 AHSPQ9NZD4 102 aa2.85□□□□□ -1.95
SMC4-218ENST00000486711 RCL1Q9Y2P8 373 aaKnown RBP2.85□□□□□ -1.95
SMC4-218ENST00000486711 ARHGAP21Q5T5U3 1957 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 NCBP2LA6PVI3 153 aaKnown RBP2.84□□□□□ -1.95
SMC4-218ENST00000486711 H7C417 338 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 BCKDKO14874 412 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 AKR7A2O43488 359 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 CTDNEP1O95476 244 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 KRT16P08779 473 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 TCN2P20062 427 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 CDKN2DP55273 166 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 CLDN18P56856 261 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 UBE2MP61081 183 aaKnown RBP2.84□□□□□ -1.95
SMC4-218ENST00000486711 RPS23P62266 143 aaKnown RBP2.84□□□□□ -1.95
SMC4-218ENST00000486711 RAB11AP62491 216 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 ZNF266Q14584 549 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 RAB11BQ15907 218 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 TCEAL5Q5H9L2 206 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 FAM71E1Q6IPT2 247 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 CEMP1Q6PRD7 247 aaPredicted RBP2.84□□□□□ -1.95
SMC4-218ENST00000486711 SNX20Q7Z614 316 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 HORMAD1Q86X24 394 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms