RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 FOXA2Q9Y261 457 aaPredicted RBP5.96□□□□□ -1.46
HDAC3-209ENST00000486618 OR10H1Q9Y4A9 318 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 ASB4Q9Y574 426 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 A0A0A6YYD5 115 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 A0A1W2PP18 115 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 TMEM213A2RRL7 107 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 MAGEA13PA6NCF6 341 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 AQP7P3A6NL99 342 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 ZNF785A8K8V0 405 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 RNASEK-C17orf49H0YIS7 233 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 SMLR1H3BR10 107 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 TEX46H3BTG2 121 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 TMPRSS11DO60235 418 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 ZIC3O60481 467 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 UGT2B11O75310 529 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 EEDO75530 441 aaKnown RBP5.95□□□□□ -1.46
HDAC3-209ENST00000486618 BANF1O75531 89 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 CRYGBP07316 175 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 GUSBP08236 651 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 SERPINB5P36952 375 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 ELK3P41970 407 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 PPICP45877 212 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 NKX2-5P52952 324 aaPredicted RBP5.95□□□□□ -1.46
HDAC3-209ENST00000486618 CTBP2P56545 445 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 DSCR4P56555 118 aaPredicted RBP5.95□□□□□ -1.46
HDAC3-209ENST00000486618 SEC61GP60059 68 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 PSPHP78330 225 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 MRPS22P82650 360 aaKnown RBP5.95□□□□□ -1.46
HDAC3-209ENST00000486618 NNATQ16517 81 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 NRF1Q16656 503 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 CYP1B1Q16678 543 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 VWC2Q2TAL6 325 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 C6orf52Q5T4I8 152 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 LCE5AQ5TCM9 118 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 MALRD1Q5VYJ5 2156 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 TRMT10BQ6PF06 316 aaKnown RBP5.95□□□□□ -1.46
HDAC3-209ENST00000486618 NPSR1Q6W5P4 371 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 STAC2Q6ZMT1 411 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 DNM1P46Q6ZS02 220 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 ANKRD46Q86W74 232 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 GABRG1Q8N1C3 465 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 LNX2Q8N448 690 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 DTX3Q8N9I9 347 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 OR4K17Q8NGC6 315 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 OR6K3Q8NGY3 331 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 OR2V1Q8NHB1 315 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 OR10J5Q8NHC4 309 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 VANGL1Q8TAA9 524 aaPredicted RBP5.95□□□□□ -1.46
HDAC3-209ENST00000486618 FNDC9Q8TBE3 224 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 STAG3L4Q8TBR4 150 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 SMAP2Q8WU79 429 aaPredicted RBP5.95□□□□□ -1.46
HDAC3-209ENST00000486618 OSTF1Q92882 214 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 SLC38A4Q969I6 547 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 LRR1Q96L50 414 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 COL21A1Q96P44 957 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 ZIM3Q96PE6 472 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 TECTBQ96PL2 329 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 MTERF1Q99551 399 aaKnown RBP5.95□□□□□ -1.46
HDAC3-209ENST00000486618 SPATA25Q9BR10 227 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 PRRG4Q9BZD6 226 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 SLC25A32Q9H2D1 315 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 RHOJQ9H4E5 214 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 PCNX3Q9H6A9 2034 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 ESRP2Q9H6T0 727 aaKnown RBP5.95□□□□□ -1.46
HDAC3-209ENST00000486618 OR2S2Q9NQN1 319 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 DUSP22Q9NRW4 184 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 PRODH2Q9UF12 536 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 ZNF639Q9UID6 485 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 FBXL2Q9UKC9 423 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 PIGLQ9Y2B2 252 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 PPP2R2CQ9Y2T4 447 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 ARL2BPQ9Y2Y0 163 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 RNF115Q9Y4L5 304 aa5.95□□□□□ -1.46
HDAC3-209ENST00000486618 TBL2Q9Y4P3 447 aaKnown RBP5.95□□□□□ -1.46
HDAC3-209ENST00000486618 PLCE1Q9P212 2302 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 A6NIZ1 184 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 KLF11O14901 512 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 SLC22A1O15245 554 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 DHHO43323 396 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 CST4P01036 141 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 IGHV4-39P01824 125 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 CHRNGP07510 517 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 SOD3P08294 240 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 DANCRP0C864 163 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 FCGR1AP12314 374 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 CD1DP15813 335 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 ANXA7P20073 488 aaKnown RBP5.94□□□□□ -1.46
HDAC3-209ENST00000486618 S1PR1P21453 382 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 SLC6A6P31641 620 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 AP2S1P53680 142 aaPredicted RBP5.94□□□□□ -1.46
HDAC3-209ENST00000486618 CDH13P55290 713 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 DSCR9P59020 149 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 B3GALT5-AS1P59052 145 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 PDIA2Q13087 525 aaKnown RBP5.94□□□□□ -1.46
HDAC3-209ENST00000486618 IL18R1Q13478 541 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 GANABQ14697 944 aaKnown RBP5.94□□□□□ -1.46
HDAC3-209ENST00000486618 GUSBP1Q15486 140 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 TMEM249Q2WGJ8 235 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 STEAP4Q687X5 459 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 ELP2Q6IA86 826 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms