RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 HSF2Q03933 536 aa15.17■□□□□ 0.02
MCF2L-226ENST00000486210 APOFQ13790 326 aa15.17■□□□□ 0.02
MCF2L-226ENST00000486210 ENDOGQ14249 297 aaKnown RBP15.17■□□□□ 0.02
MCF2L-226ENST00000486210 SWI5Q1ZZU3 235 aa15.17■□□□□ 0.02
MCF2L-226ENST00000486210 ZNF691Q5VV52 312 aa15.17■□□□□ 0.02
MCF2L-226ENST00000486210 TTC23Q5W5X9 447 aa15.17■□□□□ 0.02
MCF2L-226ENST00000486210 SLC26A10Q8NG04 563 aa15.17■□□□□ 0.02
MCF2L-226ENST00000486210 OR8J1Q8NGP2 316 aa15.17■□□□□ 0.02
MCF2L-226ENST00000486210 TFAP2CQ92754 450 aa15.17■□□□□ 0.02
MCF2L-226ENST00000486210 ZMYND19Q96E35 227 aaPredicted RBP15.17■□□□□ 0.02
MCF2L-226ENST00000486210 PIMREGQ9BSJ6 248 aa15.17■□□□□ 0.02
MCF2L-226ENST00000486210 IMPAD1Q9NX62 359 aa15.17■□□□□ 0.02
MCF2L-226ENST00000486210 DNAJC27Q9NZQ0 273 aa15.17■□□□□ 0.02
MCF2L-226ENST00000486210 ARPC4-TTLL3A0A0A6YYG9 625 aa15.16■□□□□ 0.02
MCF2L-226ENST00000486210 H0YAE9 185 aa15.16■□□□□ 0.02
MCF2L-226ENST00000486210 GLCEO94923 617 aa15.16■□□□□ 0.02
MCF2L-226ENST00000486210 HLA-DQA2P01906 255 aa15.16■□□□□ 0.02
MCF2L-226ENST00000486210 HNF1AP20823 631 aa15.16■□□□□ 0.02
MCF2L-226ENST00000486210 CAPZA2P47755 286 aa15.16■□□□□ 0.02
MCF2L-226ENST00000486210 SNRPGP62308 76 aaKnown RBP15.16■□□□□ 0.02
MCF2L-226ENST00000486210 TEKQ02763 1124 aa15.16■□□□□ 0.02
MCF2L-226ENST00000486210 PIGFQ07326 219 aa15.16■□□□□ 0.02
MCF2L-226ENST00000486210 SNCBQ16143 134 aa15.16■□□□□ 0.02
MCF2L-226ENST00000486210 KCNMB1Q16558 191 aa15.16■□□□□ 0.02
MCF2L-226ENST00000486210 CARTPTQ16568 116 aa15.16■□□□□ 0.02
MCF2L-226ENST00000486210 CR1LQ2VPA4 569 aa15.16■□□□□ 0.02
MCF2L-226ENST00000486210 NRN1LQ496H8 165 aa15.16■□□□□ 0.02
MCF2L-226ENST00000486210 FAM27BQ5VT28 67 aa15.16■□□□□ 0.02
MCF2L-226ENST00000486210 OR6K6Q8NGW6 343 aa15.16■□□□□ 0.02
MCF2L-226ENST00000486210 TRUB1Q8WWH5 349 aaKnown RBP15.16■□□□□ 0.02
MCF2L-226ENST00000486210 ZNF582Q96NG8 517 aaPredicted RBP15.16■□□□□ 0.02
MCF2L-226ENST00000486210 ZNF416Q9BWM5 594 aa15.16■□□□□ 0.02
MCF2L-226ENST00000486210 WDR76Q9H967 626 aa15.16■□□□□ 0.02
MCF2L-226ENST00000486210 MYOZ1Q9NP98 299 aaPredicted RBP15.16■□□□□ 0.02
MCF2L-226ENST00000486210 B3GNT2Q9NY97 397 aa15.16■□□□□ 0.02
MCF2L-226ENST00000486210 FBXO9Q9UK97 447 aaPredicted RBP15.16■□□□□ 0.02
MCF2L-226ENST00000486210 NDUFS8O00217 210 aa15.15■□□□□ 0.02
MCF2L-226ENST00000486210 ENTPD6O75354 484 aa15.15■□□□□ 0.02
MCF2L-226ENST00000486210 FARS2O95363 451 aaKnown RBP15.15■□□□□ 0.02
MCF2L-226ENST00000486210 TGFAP01135 160 aa15.15■□□□□ 0.02
MCF2L-226ENST00000486210 ERCC1P07992 297 aaPredicted RBP15.15■□□□□ 0.02
MCF2L-226ENST00000486210 CD79AP11912 226 aa15.15■□□□□ 0.02
MCF2L-226ENST00000486210 HOXB1P14653 301 aaPredicted RBP15.15■□□□□ 0.02
MCF2L-226ENST00000486210 RPS27P42677 84 aaKnown RBP15.15■□□□□ 0.02
MCF2L-226ENST00000486210 GUCA1AP43080 201 aaPredicted RBP15.15■□□□□ 0.02
MCF2L-226ENST00000486210 GLO1Q04760 184 aa15.15■□□□□ 0.02
MCF2L-226ENST00000486210 NXNL2Q5VZ03 156 aa15.15■□□□□ 0.02
MCF2L-226ENST00000486210 USP51Q70EK9 711 aa15.15■□□□□ 0.02
MCF2L-226ENST00000486210 MEPCEQ7L2J0 689 aaKnown RBP15.15■□□□□ 0.02
MCF2L-226ENST00000486210 SLC16A14Q7RTX9 510 aa15.15■□□□□ 0.02
MCF2L-226ENST00000486210 MDP1Q86V88 176 aa15.15■□□□□ 0.02
MCF2L-226ENST00000486210 RFLNBQ8N5W9 214 aa15.15■□□□□ 0.02
MCF2L-226ENST00000486210 RHOXF1Q8NHV9 184 aa15.15■□□□□ 0.02
MCF2L-226ENST00000486210 APH1BQ8WW43 257 aa15.15■□□□□ 0.02
MCF2L-226ENST00000486210 TEAD3Q99594 435 aa15.15■□□□□ 0.02
MCF2L-226ENST00000486210 VRK1Q99986 396 aaPredicted RBP15.15■□□□□ 0.02
MCF2L-226ENST00000486210 IGHV1-18A0A0C4DH31 117 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 B9A039 149 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 PRODHO43272 600 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 TCF21O43680 179 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 CST2P09228 141 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 MMP7P09237 267 aaPredicted RBP15.14■□□□□ 0.01
MCF2L-226ENST00000486210 ZNF32P17041 273 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 CFPP27918 469 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 GSTT1P30711 240 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 FMO3P31513 532 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 SERPINF1P36955 418 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 ISL1P61371 349 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 RPS7P62081 194 aaKnown RBP15.14■□□□□ 0.01
MCF2L-226ENST00000486210 IL5RAQ01344 420 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 MAD2L1BPQ15013 274 aaPredicted RBP15.14■□□□□ 0.01
MCF2L-226ENST00000486210 C3orf36Q3SXR2 165 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 SLC35D3Q5M8T2 416 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 VHLLQ6RSH7 139 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.14■□□□□ 0.01
MCF2L-226ENST00000486210 OR4F15Q8NGB8 312 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 ZNF75AQ96N20 296 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 APOL4Q9BPW4 351 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 CA10Q9NS85 328 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 H2AFY2Q9P0M6 372 aaPredicted RBP15.14■□□□□ 0.01
MCF2L-226ENST00000486210 COMMD3-BMI1R4GMX3 469 aa15.14■□□□□ 0.01
MCF2L-226ENST00000486210 SELENOFO60613 162 aa15.13■□□□□ 0.01
MCF2L-226ENST00000486210 CELA3BP08861 270 aa15.13■□□□□ 0.01
MCF2L-226ENST00000486210 LSM6P62312 80 aaKnown RBP15.13■□□□□ 0.01
MCF2L-226ENST00000486210 RAB1AP62820 205 aa15.13■□□□□ 0.01
MCF2L-226ENST00000486210 OCLNQ16625 522 aa15.13■□□□□ 0.01
MCF2L-226ENST00000486210 SLC25A30Q5SVS4 291 aa15.13■□□□□ 0.01
MCF2L-226ENST00000486210 CORO6Q6QEF8 472 aa15.13■□□□□ 0.01
MCF2L-226ENST00000486210 MYPOPQ86VE0 399 aaPredicted RBP15.13■□□□□ 0.01
MCF2L-226ENST00000486210 LINC00346Q8IVM7 164 aa15.13■□□□□ 0.01
MCF2L-226ENST00000486210 TIGD4Q8IY51 512 aa15.13■□□□□ 0.01
MCF2L-226ENST00000486210 CCDC36Q8IYA8 594 aa15.13■□□□□ 0.01
MCF2L-226ENST00000486210 ZNF540Q8NDQ6 660 aa15.13■□□□□ 0.01
MCF2L-226ENST00000486210 CNIH3Q8TBE1 160 aa15.13■□□□□ 0.01
MCF2L-226ENST00000486210 BPESC1Q9GZL8 116 aa15.13■□□□□ 0.01
MCF2L-226ENST00000486210 RNF121Q9H920 327 aa15.13■□□□□ 0.01
MCF2L-226ENST00000486210 MARCH7Q9H992 704 aa15.13■□□□□ 0.01
MCF2L-226ENST00000486210 LHFPL6Q9Y693 200 aa15.13■□□□□ 0.01
MCF2L-226ENST00000486210 LOC390937A0A1W2PQ73 354 aa15.12■□□□□ 0.01
MCF2L-226ENST00000486210 SPRY1O43609 319 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms