RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 LRRC28Q86X40 367 aaPredicted RBP14.45□□□□□ -0.1
SMC4-216ENST00000485645 OR5AS1Q8N127 324 aa14.45□□□□□ -0.1
SMC4-216ENST00000485645 C3orf56Q8N813 242 aa14.45□□□□□ -0.1
SMC4-216ENST00000485645 OR5L1Q8NGL2 311 aa14.45□□□□□ -0.1
SMC4-216ENST00000485645 C22orf15Q8WYQ4 148 aa14.45□□□□□ -0.1
SMC4-216ENST00000485645 POP5Q969H6 163 aaKnown RBP14.45□□□□□ -0.1
SMC4-216ENST00000485645 C7orf34Q96L11 122 aa14.45□□□□□ -0.1
SMC4-216ENST00000485645 NTN4Q9HB63 628 aa14.45□□□□□ -0.1
SMC4-216ENST00000485645 MMP26Q9NRE1 261 aa14.45□□□□□ -0.1
SMC4-216ENST00000485645 DCAF13Q9NV06 445 aaKnown RBP14.45□□□□□ -0.1
SMC4-216ENST00000485645 ATPIF1Q9UII2 106 aa14.45□□□□□ -0.1
SMC4-216ENST00000485645 SAMD4AQ9UPU9 718 aaKnown RBP14.45□□□□□ -0.1
SMC4-216ENST00000485645 TRBV4-1A0A0J9YWV2 114 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 TXNDC12O95881 172 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 DBHP09172 617 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 CRABP1P29762 137 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 CDKN2AP42771 156 aaKnown RBP14.44□□□□□ -0.1
SMC4-216ENST00000485645 SLC6A9P48067 706 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 CENPAP49450 140 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 ERFP50548 548 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 FXYD6P3P58550 94 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 SEC23BQ15437 767 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 KCNMB1Q16558 191 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 SLC27A4Q6P1M0 643 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 PGM2L1Q6PCE3 622 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 DNM1P34Q6PK57 102 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 FBXW12Q6X9E4 464 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 ATG16L2Q8NAA4 619 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 GJC3Q8NFK1 279 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 OR52J3Q8NH60 311 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 SIGLEC11Q96RL6 698 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 PLA2G12AQ9BZM1 189 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 PTTG3PQ9NZH4 202 aa14.44□□□□□ -0.1
SMC4-216ENST00000485645 POLR3KQ9Y2Y1 108 aaPredicted RBP14.44□□□□□ -0.1
SMC4-216ENST00000485645 DIRAS1O95057 198 aa14.43□□□□□ -0.1
SMC4-216ENST00000485645 MDH2P40926 338 aaKnown RBP14.43□□□□□ -0.1
SMC4-216ENST00000485645 ZNF154Q13106 437 aa14.43□□□□□ -0.1
SMC4-216ENST00000485645 HLXQ14774 488 aaPredicted RBP14.43□□□□□ -0.1
SMC4-216ENST00000485645 ZMYND11Q15326 602 aa14.43□□□□□ -0.1
SMC4-216ENST00000485645 ARMCX4Q5H9R4 360 aa14.43□□□□□ -0.1
SMC4-216ENST00000485645 OR2T2Q6IF00 324 aa14.43□□□□□ -0.1
SMC4-216ENST00000485645 SMARCD3Q6STE5 483 aa14.43□□□□□ -0.1
SMC4-216ENST00000485645 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.43□□□□□ -0.1
SMC4-216ENST00000485645 MUC20Q8N307 709 aaPredicted RBP14.43□□□□□ -0.1
SMC4-216ENST00000485645 ZDHHC22Q8N966 263 aa14.43□□□□□ -0.1
SMC4-216ENST00000485645 DEFB108BQ8NET1 73 aa14.43□□□□□ -0.1
SMC4-216ENST00000485645 OR8G5Q8NG78 346 aa14.43□□□□□ -0.1
SMC4-216ENST00000485645 DVL3Q92997 716 aaPredicted RBP14.43□□□□□ -0.1
SMC4-216ENST00000485645 APOBEC3DQ96AK3 386 aaPredicted RBP14.43□□□□□ -0.1
SMC4-216ENST00000485645 ZMYND19Q96E35 227 aaPredicted RBP14.43□□□□□ -0.1
SMC4-216ENST00000485645 DHRS1Q96LJ7 313 aa14.43□□□□□ -0.1
SMC4-216ENST00000485645 ZNF582Q96NG8 517 aaPredicted RBP14.43□□□□□ -0.1
SMC4-216ENST00000485645 TSSK2Q96PF2 358 aa14.43□□□□□ -0.1
SMC4-216ENST00000485645 ERMAPQ96PL5 475 aaPredicted RBP14.43□□□□□ -0.1
SMC4-216ENST00000485645 COQ7Q99807 217 aa14.43□□□□□ -0.1
SMC4-216ENST00000485645 HDHD2Q9H0R4 259 aa14.43□□□□□ -0.1
SMC4-216ENST00000485645 GCM1Q9NP62 436 aa14.43□□□□□ -0.1
SMC4-216ENST00000485645 SPAG4Q9NPE6 437 aa14.43□□□□□ -0.1
SMC4-216ENST00000485645 ESM1Q9NQ30 184 aa14.43□□□□□ -0.1
SMC4-216ENST00000485645 DDX28Q9NUL7 540 aaKnown RBP14.43□□□□□ -0.1
SMC4-216ENST00000485645 ADA2Q9NZK5 511 aa14.43□□□□□ -0.1
SMC4-216ENST00000485645 AUP1Q9Y679 476 aa14.43□□□□□ -0.1
SMC4-216ENST00000485645 TRAPPC2LH3BP13 241 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 TMEM178BH3BS89 294 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 IFNL4K9M1U5 179 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 DCTN3O75935 186 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 PPP1R3DO95685 299 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 GPANK1O95872 356 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 ZNF12P17014 697 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 SMIM11AP58511 58 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 SEC61A1P61619 476 aaKnown RBP14.42□□□□□ -0.1
SMC4-216ENST00000485645 HIST1H3AP68431 136 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 MEP1BQ16820 701 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 ESCO2Q56NI9 601 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 HIST2H3PS2Q5TEC6 136 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 RBMS3Q6XE24 437 aaKnown RBP14.42□□□□□ -0.1
SMC4-216ENST00000485645 HIST2H3AQ71DI3 136 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 FAM86B1Q8N7N1 296 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 OR13G1Q8NGZ3 307 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 CCT8L2Q96SF2 557 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 GPA33Q99795 319 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 SRA1Q9HD15 236 aaKnown RBP14.42□□□□□ -0.1
SMC4-216ENST00000485645 FAM53CQ9NYF3 392 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 NUP50Q9UKX7 468 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 B9D1Q9UPM9 204 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 PPIAL4AQ9Y536 164 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 INSIG2Q9Y5U4 225 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 LHFPL6Q9Y693 200 aa14.42□□□□□ -0.1
SMC4-216ENST00000485645 A8MXK9 166 aa14.41□□□□□ -0.1
SMC4-216ENST00000485645 F5H0A9 414 aaPredicted RBP14.41□□□□□ -0.1
SMC4-216ENST00000485645 DCTN6O00399 190 aa14.41□□□□□ -0.1
SMC4-216ENST00000485645 SLC6A6P31641 620 aa14.41□□□□□ -0.1
SMC4-216ENST00000485645 SRP9P49458 86 aaKnown RBP14.41□□□□□ -0.1
SMC4-216ENST00000485645 MMP16P51512 607 aa14.41□□□□□ -0.1
SMC4-216ENST00000485645 UBA52P62987 128 aaKnown RBP14.41□□□□□ -0.1
SMC4-216ENST00000485645 RFX4Q33E94 735 aa14.41□□□□□ -0.1
SMC4-216ENST00000485645 LEG1Q6P5S2 330 aa14.41□□□□□ -0.1
SMC4-216ENST00000485645 CORO6Q6QEF8 472 aa14.41□□□□□ -0.1
SMC4-216ENST00000485645 JAZF1Q86VZ6 243 aa14.41□□□□□ -0.1
SMC4-216ENST00000485645 RNF148Q8N7C7 305 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms