RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 RGS7BPQ6MZT1 257 aaPredicted RBP7.16□□□□□ -1.26
SF3A1-208ENST00000485618 CORO6Q6QEF8 472 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 DEGS2Q6QHC5 323 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 DRAM2Q6UX65 266 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 HIST2H3AQ71DI3 136 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 VASH1Q7L8A9 365 aaPredicted RBP7.16□□□□□ -1.26
SF3A1-208ENST00000485618 DCXRQ7Z4W1 244 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 MUC15Q8N387 334 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 CPEB3Q8NE35 698 aaKnown RBP7.16□□□□□ -1.26
SF3A1-208ENST00000485618 OR2T27Q8NH04 317 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 THEM6Q8WUY1 208 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 ITFG2Q969R8 447 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 APOBEC3DQ96AK3 386 aaPredicted RBP7.16□□□□□ -1.26
SF3A1-208ENST00000485618 ZMYND19Q96E35 227 aaPredicted RBP7.16□□□□□ -1.26
SF3A1-208ENST00000485618 POM121L2Q96KW2 1035 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 ATF6BQ99941 703 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 COPS4Q9BT78 406 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 MROQ9BYG7 248 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 WNT5BQ9H1J7 359 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 PLEKHF2Q9H8W4 249 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 MED20Q9H944 212 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 MARCH7Q9H992 704 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 NOX3Q9HBY0 568 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 CENPMQ9NSP4 180 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 BEX4Q9NWD9 120 aaPredicted RBP7.16□□□□□ -1.26
SF3A1-208ENST00000485618 SLCO1C1Q9NYB5 712 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 ZNF224Q9NZL3 707 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 ST6GALNAC2Q9UJ37 374 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 RRP15Q9Y3B9 282 aaKnown RBP7.16□□□□□ -1.26
SF3A1-208ENST00000485618 GRIP1Q9Y3R0 1128 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 LHFPL6Q9Y693 200 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 COMMD3-BMI1R4GMX3 469 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 PRR14LQ5THK1 2151 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 PLSCR5A0PG75 271 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 ZNF503-AS2A6NEH8 195 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 ZNF670-ZNF695F2Z2N8 137 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 F5H5K5 113 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 RER1O15258 196 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 SIAH2O43255 324 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 SMPD2O60906 423 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 ATP6V1G2O95670 118 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 FADS2O95864 444 aaKnown RBP7.15□□□□□ -1.26
SF3A1-208ENST00000485618 SCG5P05408 212 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 CELA3BP08861 270 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 RPSAP08865 295 aaKnown RBP7.15□□□□□ -1.26
SF3A1-208ENST00000485618 H2BFMP0C1H6 154 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 CLUP10909 449 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 SELEP16581 610 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 CFL1P23528 166 aaKnown RBP7.15□□□□□ -1.26
SF3A1-208ENST00000485618 EPHA2P29317 976 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 CAPGP40121 348 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 SLC6A9P48067 706 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 EFNB1P98172 346 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 IL5RAQ01344 420 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 GGTLC2Q14390 218 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 SNCBQ16143 134 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 MEP1BQ16820 701 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 KLHL22Q53GT1 634 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 ZMAT1Q5H9K5 638 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 FAM209AQ5JX71 171 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 KRT80Q6KB66 452 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 TMEM154Q6P9G4 183 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 VHLLQ6RSH7 139 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 PAMR1Q6UXH9 720 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 DPY19L4Q7Z388 723 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 KRT77Q7Z794 578 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 EGFL6Q8IUX8 553 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 TIGD4Q8IY51 512 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 C8orf59Q8N0T1 100 aaPredicted RBP7.15□□□□□ -1.26
SF3A1-208ENST00000485618 KBTBD8Q8NFY9 601 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 OR52H1Q8NGJ2 320 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 OR1J1Q8NGS3 322 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 RHOXF1Q8NHV9 184 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 OTOSQ8NHW6 89 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 FGFBP3Q8TAT2 258 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 SYNPRQ8TBG9 265 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 SNX33Q8WV41 574 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 HTRA1Q92743 480 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 MBD6Q96DN6 1003 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 SLAMF6Q96DU3 332 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 MS4A3Q96HJ5 214 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 ZNF75AQ96N20 296 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 ZNF582Q96NG8 517 aaPredicted RBP7.15□□□□□ -1.26
SF3A1-208ENST00000485618 HS3ST6Q96QI5 342 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 MBOAT4Q96T53 435 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 FOXC2Q99958 501 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 TMUB1Q9BVT8 246 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 HCAR1Q9BXC0 346 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 MS4A5Q9H3V2 200 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 PLK3Q9H4B4 646 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 Q9H521 79 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 BARX1Q9HBU1 254 aaPredicted RBP7.15□□□□□ -1.26
SF3A1-208ENST00000485618 CYSLTR2Q9NS75 346 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 CBLN4Q9NTU7 201 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 DDX28Q9NUL7 540 aaKnown RBP7.15□□□□□ -1.26
SF3A1-208ENST00000485618 MRPL22Q9NWU5 206 aaKnown RBP7.15□□□□□ -1.26
SF3A1-208ENST00000485618 CHCHD3Q9NX63 227 aaKnown RBP7.15□□□□□ -1.26
SF3A1-208ENST00000485618 CGGBP1Q9UFW8 167 aaPredicted RBP7.15□□□□□ -1.26
SF3A1-208ENST00000485618 DUSP13Q9UII6 198 aa7.15□□□□□ -1.26
SF3A1-208ENST00000485618 NOP16Q9Y3C1 178 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms