RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 HMGN1P05114 100 aa16.37■□□□□ 0.21
SNX17-206ENST00000484886 GGT2P36268 569 aa16.37■□□□□ 0.21
SNX17-206ENST00000484886 ECH1Q13011 328 aa16.37■□□□□ 0.21
SNX17-206ENST00000484886 GGTLC2Q14390 218 aa16.37■□□□□ 0.21
SNX17-206ENST00000484886 ACSM5Q6NUN0 579 aa16.37■□□□□ 0.21
SNX17-206ENST00000484886 ZDHHC13Q8IUH4 622 aa16.37■□□□□ 0.21
SNX17-206ENST00000484886 ZNF511Q8NB15 262 aa16.37■□□□□ 0.21
SNX17-206ENST00000484886 GTF3AQ92664 365 aaKnown RBP16.37■□□□□ 0.21
SNX17-206ENST00000484886 DUS3LQ96G46 650 aaKnown RBP16.37■□□□□ 0.21
SNX17-206ENST00000484886 COG8Q96MW5 612 aa16.37■□□□□ 0.21
SNX17-206ENST00000484886 ATF6BQ99941 703 aa16.37■□□□□ 0.21
SNX17-206ENST00000484886 NMNAT2Q9BZQ4 307 aa16.37■□□□□ 0.21
SNX17-206ENST00000484886 SEMA6AQ9H2E6 1030 aa16.37■□□□□ 0.21
SNX17-206ENST00000484886 WDR76Q9H967 626 aa16.37■□□□□ 0.21
SNX17-206ENST00000484886 KRT84Q9NSB2 600 aa16.37■□□□□ 0.21
SNX17-206ENST00000484886 COMMD3-BMI1R4GMX3 469 aa16.37■□□□□ 0.21
SNX17-206ENST00000484886 C17orf100A8MU93 164 aa16.36■□□□□ 0.21
SNX17-206ENST00000484886 PRR23D1E9PI22 279 aaPredicted RBP16.36■□□□□ 0.21
SNX17-206ENST00000484886 F5H5K5 113 aa16.36■□□□□ 0.21
SNX17-206ENST00000484886 LYNX1G3V0Z9 82 aa16.36■□□□□ 0.21
SNX17-206ENST00000484886 H3BSA7 217 aa16.36■□□□□ 0.21
SNX17-206ENST00000484886 PRR23D2P0DMB1 279 aaPredicted RBP16.36■□□□□ 0.21
SNX17-206ENST00000484886 LYNX1P0DP58 116 aa16.36■□□□□ 0.21
SNX17-206ENST00000484886 RGS6P49758 472 aa16.36■□□□□ 0.21
SNX17-206ENST00000484886 ENTPD1P49961 510 aa16.36■□□□□ 0.21
SNX17-206ENST00000484886 DAPP51397 102 aa16.36■□□□□ 0.21
SNX17-206ENST00000484886 ZNF81P51508 661 aa16.36■□□□□ 0.21
SNX17-206ENST00000484886 BLVRAP53004 296 aa16.36■□□□□ 0.21
SNX17-206ENST00000484886 KPNB1Q14974 876 aaKnown RBP16.36■□□□□ 0.21
SNX17-206ENST00000484886 TMEM236Q5W0B7 351 aa16.36■□□□□ 0.21
SNX17-206ENST00000484886 FAHD1Q6P587 224 aa16.36■□□□□ 0.21
SNX17-206ENST00000484886 OR5L1Q8NGL2 311 aa16.36■□□□□ 0.21
SNX17-206ENST00000484886 PYDC1Q8WXC3 89 aa16.36■□□□□ 0.21
SNX17-206ENST00000484886 OR51V1Q9H2C8 321 aa16.36■□□□□ 0.21
SNX17-206ENST00000484886 POFUT1Q9H488 388 aa16.36■□□□□ 0.21
SNX17-206ENST00000484886 STARD10Q9Y365 291 aa16.36■□□□□ 0.21
SNX17-206ENST00000484886 CR1P17927 2039 aa16.36■□□□□ 0.21
SNX17-206ENST00000484886 ZNF593O00488 134 aaPredicted RBP16.35■□□□□ 0.21
SNX17-206ENST00000484886 HPXP02790 462 aa16.35■□□□□ 0.21
SNX17-206ENST00000484886 USF1P22415 310 aaPredicted RBP16.35■□□□□ 0.21
SNX17-206ENST00000484886 TUBG1P23258 451 aa16.35■□□□□ 0.21
SNX17-206ENST00000484886 NR4A2P43354 598 aa16.35■□□□□ 0.21
SNX17-206ENST00000484886 MAGEB1P43366 347 aa16.35■□□□□ 0.21
SNX17-206ENST00000484886 CRISP1P54107 249 aa16.35■□□□□ 0.21
SNX17-206ENST00000484886 CCL8P80075 99 aa16.35■□□□□ 0.21
SNX17-206ENST00000484886 CDK5Q00535 292 aa16.35■□□□□ 0.21
SNX17-206ENST00000484886 TAF13Q15543 124 aa16.35■□□□□ 0.21
SNX17-206ENST00000484886 TSTQ16762 297 aaKnown RBP16.35■□□□□ 0.21
SNX17-206ENST00000484886 PCGF3Q3KNV8 242 aa16.35■□□□□ 0.21
SNX17-206ENST00000484886 KLHL12Q53G59 568 aa16.35■□□□□ 0.21
SNX17-206ENST00000484886 PLBD1Q6P4A8 553 aa16.35■□□□□ 0.21
SNX17-206ENST00000484886 DCXRQ7Z4W1 244 aa16.35■□□□□ 0.21
SNX17-206ENST00000484886 ERI1Q8IV48 349 aaKnown RBP16.35■□□□□ 0.21
SNX17-206ENST00000484886 ZNF786Q8N393 782 aa16.35■□□□□ 0.21
SNX17-206ENST00000484886 ZNF540Q8NDQ6 660 aa16.35■□□□□ 0.21
SNX17-206ENST00000484886 APOBEC3DQ96AK3 386 aaPredicted RBP16.35■□□□□ 0.21
SNX17-206ENST00000484886 MAP6Q96JE9 813 aa16.35■□□□□ 0.21
SNX17-206ENST00000484886 HCAR1Q9BXC0 346 aa16.35■□□□□ 0.21
SNX17-206ENST00000484886 TUBG2Q9NRH3 451 aa16.35■□□□□ 0.21
SNX17-206ENST00000484886 DECR2Q9NUI1 292 aa16.35■□□□□ 0.21
SNX17-206ENST00000484886 PTTG3PQ9NZH4 202 aa16.35■□□□□ 0.21
SNX17-206ENST00000484886 SURF4O15260 269 aa16.34■□□□□ 0.21
SNX17-206ENST00000484886 SPRY3O43610 288 aa16.34■□□□□ 0.21
SNX17-206ENST00000484886 NCR1O76036 304 aa16.34■□□□□ 0.21
SNX17-206ENST00000484886 GSTT1P30711 240 aa16.34■□□□□ 0.21
SNX17-206ENST00000484886 SLC6A9P48067 706 aa16.34■□□□□ 0.21
SNX17-206ENST00000484886 ACTR3P61158 418 aa16.34■□□□□ 0.21
SNX17-206ENST00000484886 RPS7P62081 194 aaKnown RBP16.34■□□□□ 0.21
SNX17-206ENST00000484886 LOXL1Q08397 574 aaPredicted RBP16.34■□□□□ 0.21
SNX17-206ENST00000484886 ZMAT1Q5H9K5 638 aa16.34■□□□□ 0.21
SNX17-206ENST00000484886 RDH5Q92781 318 aa16.34■□□□□ 0.21
SNX17-206ENST00000484886 SPTSSAQ969W0 71 aa16.34■□□□□ 0.21
SNX17-206ENST00000484886 CMBLQ96DG6 245 aa16.34■□□□□ 0.21
SNX17-206ENST00000484886 CENPNQ96H22 339 aaPredicted RBP16.34■□□□□ 0.21
SNX17-206ENST00000484886 INTS14Q96SY0 518 aa16.34■□□□□ 0.21
SNX17-206ENST00000484886 COPS4Q9BT78 406 aa16.34■□□□□ 0.21
SNX17-206ENST00000484886 BPESC1Q9GZL8 116 aa16.34■□□□□ 0.21
SNX17-206ENST00000484886 SLC25A19Q9HC21 320 aa16.34■□□□□ 0.21
SNX17-206ENST00000484886 CYSLTR2Q9NS75 346 aa16.34■□□□□ 0.21
SNX17-206ENST00000484886 CENPMQ9NSP4 180 aa16.34■□□□□ 0.21
SNX17-206ENST00000484886 TVP23BQ9NYZ1 205 aa16.34■□□□□ 0.21
SNX17-206ENST00000484886 CHD3Q12873 2000 aaKnown RBP16.34■□□□□ 0.21
SNX17-206ENST00000484886 SAC3D1A6NKF1 404 aa16.33■□□□□ 0.2
SNX17-206ENST00000484886 J3QW42 95 aa16.33■□□□□ 0.2
SNX17-206ENST00000484886 MITFO75030 526 aaPredicted RBP16.33■□□□□ 0.2
SNX17-206ENST00000484886 TPTEP56180 551 aa16.33■□□□□ 0.2
SNX17-206ENST00000484886 PSG7Q13046 419 aa16.33■□□□□ 0.2
SNX17-206ENST00000484886 EIF2B1Q14232 305 aaKnown RBP16.33■□□□□ 0.2
SNX17-206ENST00000484886 SNAPC1Q16533 368 aa16.33■□□□□ 0.2
SNX17-206ENST00000484886 SPATC1Q76KD6 591 aa16.33■□□□□ 0.2
SNX17-206ENST00000484886 CPOQ8IVL8 374 aa16.33■□□□□ 0.2
SNX17-206ENST00000484886 PARP8Q8N3A8 854 aa16.33■□□□□ 0.2
SNX17-206ENST00000484886 OR6N2Q8NGY6 317 aa16.33■□□□□ 0.2
SNX17-206ENST00000484886 RAB3IPQ96QF0 476 aaPredicted RBP16.33■□□□□ 0.2
SNX17-206ENST00000484886 PRRG3Q9BZD7 231 aa16.33■□□□□ 0.2
SNX17-206ENST00000484886 MSL2Q9HCI7 577 aa16.33■□□□□ 0.2
SNX17-206ENST00000484886 PNRC2Q9NPJ4 139 aaKnown RBP16.33■□□□□ 0.2
SNX17-206ENST00000484886 CGGBP1Q9UFW8 167 aaPredicted RBP16.33■□□□□ 0.2
SNX17-206ENST00000484886 PURGQ9UJV8 347 aaKnown RBP16.33■□□□□ 0.2
SNX17-206ENST00000484886 VWC2LB2RUY7 222 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms