RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 OR6Q1Q8NGQ2 317 aa3.19□□□□□ -1.9
VPS13A-211ENST00000484581 IL22RA2Q969J5 263 aa3.19□□□□□ -1.9
VPS13A-211ENST00000484581 RNF170Q96K19 258 aa3.19□□□□□ -1.9
VPS13A-211ENST00000484581 AGMATQ9BSE5 352 aa3.19□□□□□ -1.9
VPS13A-211ENST00000484581 HINT2Q9BX68 163 aa3.19□□□□□ -1.9
VPS13A-211ENST00000484581 ARMC7Q9H6L4 198 aa3.19□□□□□ -1.9
VPS13A-211ENST00000484581 TREM1Q9NP99 234 aa3.19□□□□□ -1.9
VPS13A-211ENST00000484581 ZNF302Q9NR11 478 aa3.19□□□□□ -1.9
VPS13A-211ENST00000484581 MMP26Q9NRE1 261 aa3.19□□□□□ -1.9
VPS13A-211ENST00000484581 SLC7A10Q9NS82 523 aa3.19□□□□□ -1.9
VPS13A-211ENST00000484581 SLC39A1Q9NY26 324 aa3.19□□□□□ -1.9
VPS13A-211ENST00000484581 ZNF229Q9UJW7 825 aa3.19□□□□□ -1.9
VPS13A-211ENST00000484581 HEBP2Q9Y5Z4 205 aa3.19□□□□□ -1.9
VPS13A-211ENST00000484581 MRPS18BQ9Y676 258 aaKnown RBP3.19□□□□□ -1.9
VPS13A-211ENST00000484581 MAP3K19Q56UN5 1328 aa3.19□□□□□ -1.9
VPS13A-211ENST00000484581 PIKFYVEQ9Y2I7 2098 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 IGLV1-36A0A0B4J1U3 117 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 RAB19A4D1S5 217 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 HACD1B0YJ81 288 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 PRMT5O14744 637 aaPredicted RBP3.18□□□□□ -1.9
VPS13A-211ENST00000484581 HDAC3O15379 428 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 ENTPD5O75356 428 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 RETP07949 1114 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 ZDHHC11BP0C7U3 371 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 CNR1P21554 472 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 USF1P22415 310 aaPredicted RBP3.18□□□□□ -1.9
VPS13A-211ENST00000484581 RBMXP38159 391 aaKnown RBP3.18□□□□□ -1.9
VPS13A-211ENST00000484581 KCNJ3P48549 501 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 UCNP55089 124 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 TAS2R39P59534 338 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 LYZP61626 148 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 SMARCB1Q12824 385 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 PSG3Q16557 428 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 PTPN20Q4JDL3 420 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 C12orf54Q6X4T0 127 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 ZNF621Q6ZSS3 439 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 STRADAQ7RTN6 431 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 MRPL55Q7Z7F7 128 aaKnown RBP3.18□□□□□ -1.9
VPS13A-211ENST00000484581 FAM71AQ8IYT1 594 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 LYG1Q8N1E2 194 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 STPG2Q8N412 459 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 CBR4Q8N4T8 237 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 NPWQ8N729 165 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 SUMF2Q8NBJ7 301 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 CHST4Q8NCG5 386 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 OR5AR1Q8NGP9 310 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 OR8D1Q8WZ84 308 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 CREB3L1Q96BA8 519 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 NRBF2Q96F24 287 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 GALNT14Q96FL9 552 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 SLC35E1Q96K37 410 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 ACBD6Q9BR61 282 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 ZNHIT6Q9NWK9 470 aaKnown RBP3.18□□□□□ -1.9
VPS13A-211ENST00000484581 ZNF226Q9NYT6 803 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 SLC25A37Q9NYZ2 338 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 STMN3Q9NZ72 180 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 PCYOX1Q9UHG3 505 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 NUFIP1Q9UHK0 495 aaKnown RBP3.18□□□□□ -1.9
VPS13A-211ENST00000484581 TRAPPC4Q9Y296 219 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 PDS5BQ9NTI5 1447 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 MROH7Q68CQ1 1323 aa3.18□□□□□ -1.9
VPS13A-211ENST00000484581 ANKRD65E5RJM6 399 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 KMOO15229 486 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 EMC8O43402 210 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 GNAO1P09471 354 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 OR8U9P0C7N5 309 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 PSMC3P17980 439 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 WARSP23381 471 aaKnown RBP3.17□□□□□ -1.9
VPS13A-211ENST00000484581 HTR2CP28335 458 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 PFN2P35080 140 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 DEKP35659 375 aaKnown RBP3.17□□□□□ -1.9
VPS13A-211ENST00000484581 RAB7AP51149 207 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 ZNF138P52744 262 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 STX17P56962 302 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 SLC7A9P82251 487 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 XRCC4Q13426 336 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 ART3Q13508 389 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 ATP6V1FQ16864 119 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 CHRFAM7AQ494W8 412 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 RSBN1Q5VWQ0 802 aaPredicted RBP3.17□□□□□ -1.9
VPS13A-211ENST00000484581 OTPQ5XKR4 325 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 ABHD12BQ7Z5M8 362 aaPredicted RBP3.17□□□□□ -1.9
VPS13A-211ENST00000484581 ARRDC1Q8N5I2 433 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 OR6K6Q8NGW6 343 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 OR8U1Q8NH10 309 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 OR6X1Q8NH79 312 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 ACTRT1Q8TDG2 376 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 DNAJC19Q96DA6 116 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 SCGB3A2Q96PL1 93 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 OR2M2Q96R28 347 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 PYGO2Q9BRQ0 406 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 PRRG3Q9BZD7 231 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 PARP12Q9H0J9 701 aaKnown RBP3.17□□□□□ -1.9
VPS13A-211ENST00000484581 ANKHQ9HCJ1 492 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 CTSFQ9UBX1 484 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 V9GYY9 64 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 NFASCO94856 1347 aa3.17□□□□□ -1.9
VPS13A-211ENST00000484581 AGRNO00468 2067 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 SBNO1A3KN83 1393 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 CIB4A0PJX0 185 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms