RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 RNF126Q9BV68 326 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 C20orf85Q9H1P6 137 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 ASB8Q9H765 288 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 JPT2Q9H910 190 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 ISYNA1Q9NPH2 558 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 KCNJ16Q9NPI9 418 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 ASCL3Q9NQ33 180 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 PLEKHJ1Q9NW61 149 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 SLC25A37Q9NYZ2 338 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 PYGO1Q9Y3Y4 419 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 ABCB11O95342 1321 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 MAP3K15Q6ZN16 1313 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 SMCHD1A6NHR9 2005 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 IGHV3OR16-13A0A075B7E8 117 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 TRAV9-2A0A087WT02 112 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 TRAV39A0A0B4J263 110 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 IGHV3-16A0A0C4DH30 117 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 A0A0G2JLM5 398 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 A0A0G2JRQ6 117 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 RBMY1BA6NDE4 496 aaKnown RBP3.5□□□□□ -1.85
PTCD3-214ENST00000483925 RBMY1EA6NEQ0 496 aaKnown RBP3.5□□□□□ -1.85
PTCD3-214ENST00000483925 RPL37AP8A6NKH3 93 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 HIDE1A8MVS5 230 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 ANKRD65E5RJM6 399 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 ZNF593O00488 134 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-214ENST00000483925 SLC16A4O15374 487 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 SLC31A1O15431 190 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 CRXO43186 299 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-214ENST00000483925 ENSAO43768 121 aaKnown RBP3.5□□□□□ -1.85
PTCD3-214ENST00000483925 ADAP1O75689 374 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 SNAP29O95721 258 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 ORM1P02763 201 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 RBMY1DP0C7P1 496 aaKnown RBP3.5□□□□□ -1.85
PTCD3-214ENST00000483925 RBMY1A1P0DJD3 496 aaKnown RBP3.5□□□□□ -1.85
PTCD3-214ENST00000483925 MLNP12872 115 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 PLA2G2AP14555 144 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 USF1P22415 310 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-214ENST00000483925 KLK7P49862 253 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 RAB7AP51149 207 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 FABP6P51161 128 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 SELENOTP62341 195 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 HMGCS1Q01581 520 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 TGFBR3Q03167 851 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 KDSRQ06136 332 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 C2orf54Q08AI8 447 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 STX4Q12846 297 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 CAPRIN1Q14444 709 aaKnown RBP3.5□□□□□ -1.85
PTCD3-214ENST00000483925 CEP85LQ5SZL2 805 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 C9orf66Q5T8R8 295 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 ZNF324BQ6AW86 544 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-214ENST00000483925 C12orf54Q6X4T0 127 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 TMEM179Q6ZVK1 233 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 CDC20BQ86Y33 519 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 STX12Q86Y82 276 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 CBLN2Q8IUK8 224 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 NAXDQ8IW45 347 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 PGAM4Q8N0Y7 254 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 CYP4Z2PQ8N1L4 340 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 PNKDQ8N490 385 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 CBR4Q8N4T8 237 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 LRRC52Q8N7C0 313 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 MDS2Q8NDY4 140 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 LFNGQ8NES3 379 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 OR6Q1Q8NGQ2 317 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 OR6X1Q8NH79 312 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 CCDC26Q8TAB7 109 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 RNASEH2CQ8TDP1 164 aaKnown RBP3.5□□□□□ -1.85
PTCD3-214ENST00000483925 SDR42E1Q8WUS8 393 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 CHCHD10Q8WYQ3 142 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-214ENST00000483925 CMTM5Q96DZ9 223 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 ADTRPQ96IZ2 230 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 P2RX4Q99571 388 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 C9orf16Q9BUW7 83 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 PARD6GQ9BYG4 376 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-214ENST00000483925 DSN1Q9H410 356 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 ZDHHC4Q9NPG8 344 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 TMEM9BQ9NQ34 198 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 IFT46Q9NQC8 304 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 NLE1Q9NVX2 485 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-214ENST00000483925 SLC39A1Q9NY26 324 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 FBXL3Q9UKT7 428 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 PRELID1Q9Y255 219 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 ZNF256Q9Y2P7 627 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-214ENST00000483925 KIAA0232Q92628 1395 aa3.5□□□□□ -1.85
PTCD3-214ENST00000483925 ELP1O95163 1332 aa3.49□□□□□ -1.85
PTCD3-214ENST00000483925 IGHV1OR15-1A0A075B7D0 117 aa3.49□□□□□ -1.85
PTCD3-214ENST00000483925 IGHV7-81A0A0B4J1V7 117 aa3.49□□□□□ -1.85
PTCD3-214ENST00000483925 ZNF726A6NNF4 738 aa3.49□□□□□ -1.85
PTCD3-214ENST00000483925 C12orf77C9JDV5 145 aa3.49□□□□□ -1.85
PTCD3-214ENST00000483925 K7EMT4 169 aa3.49□□□□□ -1.85
PTCD3-214ENST00000483925 ACOT8O14734 319 aa3.49□□□□□ -1.85
PTCD3-214ENST00000483925 AGPAT2O15120 278 aa3.49□□□□□ -1.85
PTCD3-214ENST00000483925 SLC16A7O60669 478 aa3.49□□□□□ -1.85
PTCD3-214ENST00000483925 SRP72O76094 671 aaKnown RBP3.49□□□□□ -1.85
PTCD3-214ENST00000483925 AIFM1O95831 613 aa3.49□□□□□ -1.85
PTCD3-214ENST00000483925 APOEP02649 317 aa3.49□□□□□ -1.85
PTCD3-214ENST00000483925 OR5AL1P0C617 328 aa3.49□□□□□ -1.85
PTCD3-214ENST00000483925 PATE4P0C8F1 98 aa3.49□□□□□ -1.85
PTCD3-214ENST00000483925 ZSCAN5DPP0CG00 497 aa3.49□□□□□ -1.85
PTCD3-214ENST00000483925 LIPCP11150 499 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms