RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 TXNIPQ9H3M7 391 aa8.97□□□□□ -0.97
SMARCC1-205ENST00000483847 SMURF1Q9HCE7 757 aa8.97□□□□□ -0.97
SMARCC1-205ENST00000483847 TUBG2Q9NRH3 451 aa8.97□□□□□ -0.97
SMARCC1-205ENST00000483847 NECAP2Q9NVZ3 263 aa8.97□□□□□ -0.97
SMARCC1-205ENST00000483847 STX18Q9P2W9 335 aaKnown RBP8.97□□□□□ -0.97
SMARCC1-205ENST00000483847 VPREB3Q9UKI3 123 aa8.97□□□□□ -0.97
SMARCC1-205ENST00000483847 NPIPB13A6NJU9 1138 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 NPIPB4C9JG80 1138 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 SNNO75324 88 aaPredicted RBP8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 FCN3O75636 299 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 HLA-DPB1P04440 258 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 DBHP09172 617 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 COX5BP10606 129 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 CD247P20963 164 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 PRSS12P56730 875 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 ARF6P62330 175 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 HERPUD1Q15011 391 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 CLEC12AQ5QGZ9 265 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 METTL11BQ5VVY1 283 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 Q6ZTK2 550 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 SYT9Q86SS6 491 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 IGFN1Q86VF2 1251 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 NKAIN4Q8IVV8 208 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 C1orf87Q8N0U7 546 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 LYG1Q8N1E2 194 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 TMEM255BQ8WV15 326 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 LRTOMTQ8WZ04 291 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 SGTBQ96EQ0 304 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 RBP7Q96R05 134 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 PAIP2Q9BPZ3 127 aaKnown RBP8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 ALG12Q9BV10 488 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 PCDHAC1Q9H158 963 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 MMADHCQ9H3L0 296 aaPredicted RBP8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 POLE4Q9NR33 117 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 FOXJ3Q9UPW0 622 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 GMEB1Q9Y692 573 aa8.96□□□□□ -0.98
SMARCC1-205ENST00000483847 GMNCA6NCL1 334 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 H7C1C5 153 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 SGCEO43556 437 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 FAM20BO75063 409 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 LIPFP07098 398 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 NR2C1P13056 603 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 PPIBP23284 216 aaKnown RBP8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 RPL27P61353 136 aaKnown RBP8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 LCN6P62502 163 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 PRB3Q04118 309 aaPredicted RBP8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 SCRN3Q0VDG4 424 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 MAB21L1Q13394 359 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 MPPED2Q15777 294 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 ALG10Q5BKT4 473 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 PRAMEF6Q5VXH4 476 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 CD276Q5ZPR3 534 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 SFRP4Q6FHJ7 346 aaPredicted RBP8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 BLOC1S3Q6QNY0 202 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 CCBE1Q6UXH8 406 aaPredicted RBP8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 FBXW12Q6X9E4 464 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 LIPHQ8WWY8 451 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 TAMM41Q96BW9 452 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 ZNF582Q96NG8 517 aaPredicted RBP8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 CPPED1Q9BRF8 314 aaPredicted RBP8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 WDR76Q9H967 626 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 SSU72Q9NP77 194 aaKnown RBP8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 UFSP2Q9NUQ7 469 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 ZNRD1Q9P1U0 126 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 FBLN5Q9UBX5 448 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 FAM96BQ9Y3D0 163 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 USH1CQ9Y6N9 552 aa8.95□□□□□ -0.98
SMARCC1-205ENST00000483847 LOC100653049A0A140TA62 436 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 A0A1B0GWJ7 208 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 OR6C6A6NF89 314 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 FBP2O00757 339 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 ADAM20O43506 726 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 OR10H3O60404 316 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 KRT34O76011 436 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 IRF2P14316 349 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 TNFRSF1BP20333 461 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 GABRA5P31644 462 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 TGFBR2P37173 567 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 GUCA1AP43080 201 aaPredicted RBP8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 GATA4P43694 442 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 NPY4RP50391 375 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 EFNB2P52799 333 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 CRYBA2P53672 197 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 WDR4P57081 412 aaKnown RBP8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 KRT71Q3SY84 523 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 C1orf122Q6ZSJ8 110 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 FGFRL1Q8N441 504 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 ZNF454Q8N9F8 522 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 BOLLQ8N9W6 283 aaKnown RBP8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 PNLDC1Q8NA58 520 aaKnown RBP8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 PPP1R35Q8TAP8 253 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 Q8TCH9 128 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 CFHR4Q92496 578 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 PHF21AQ96BD5 680 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 SPDL1Q96EA4 605 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 TMEM109Q9BVC6 243 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 PPA2Q9H2U2 334 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 KCNK9Q9NPC2 374 aa8.94□□□□□ -0.98
SMARCC1-205ENST00000483847 THAP1Q9NVV9 213 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms