RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 OR51L1Q8NGJ5 315 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 OR2AJ1Q8NGZ0 328 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 CDADC1Q9BWV3 514 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 TPK1Q9H3S4 243 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 HINT3Q9NQE9 182 aaKnown RBP15.39■□□□□ 0.05
HDAC6-225ENST00000483506 NKIRAS2Q9NYR9 191 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 KIF17Q9P2E2 1029 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 CGGBP1Q9UFW8 167 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-225ENST00000483506 NIPBLQ6KC79 2804 aaeCLIP15.38■□□□□ 0.05
HDAC6-225ENST00000483506 C17orf100A8MU93 164 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 G3V2T6 193 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 LY6G6DO95868 133 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 GYPBP06028 91 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 DBHP09172 617 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 CLUP10909 449 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 NAT2P11245 290 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 PSKH1P11801 424 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 DAOP14920 347 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 MMP15P51511 669 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 ESRRGP62508 458 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 MRPS11P82912 194 aaKnown RBP15.38■□□□□ 0.05
HDAC6-225ENST00000483506 KRTAP1-1Q07627 177 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 LOXL1Q08397 574 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-225ENST00000483506 KDM4DQ6B0I6 523 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 LYPD4Q6UWN0 246 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 CLEC9AQ6UXN8 241 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 COLCA1Q6ZS62 124 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 ZDHHC13Q8IUH4 622 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 SNX33Q8WV41 574 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 LRTOMTQ8WZ04 291 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 PTP4A1Q93096 173 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 CENPNQ96H22 339 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-225ENST00000483506 MAP6Q96JE9 813 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 ATF6BQ99941 703 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 HCAR1Q9BXC0 346 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 MARCH7Q9H992 704 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 DDX28Q9NUL7 540 aaKnown RBP15.38■□□□□ 0.05
HDAC6-225ENST00000483506 C2CD3Q4AC94 2353 aa15.38■□□□□ 0.05
HDAC6-225ENST00000483506 ABCA1O95477 2261 aa15.37■□□□□ 0.05
HDAC6-225ENST00000483506 TVP23AA6NH52 213 aa15.37■□□□□ 0.05
HDAC6-225ENST00000483506 FAM183AA6NL82 134 aa15.37■□□□□ 0.05
HDAC6-225ENST00000483506 ADH4P08319 380 aa15.37■□□□□ 0.05
HDAC6-225ENST00000483506 PAICSP22234 425 aaKnown RBP15.37■□□□□ 0.05
HDAC6-225ENST00000483506 ENTPD1P49961 510 aa15.37■□□□□ 0.05
HDAC6-225ENST00000483506 CRISP1P54107 249 aa15.37■□□□□ 0.05
HDAC6-225ENST00000483506 PCGF3Q3KNV8 242 aa15.37■□□□□ 0.05
HDAC6-225ENST00000483506 AMIGO2Q86SJ2 522 aa15.37■□□□□ 0.05
HDAC6-225ENST00000483506 OR10S1Q8NGN2 331 aa15.37■□□□□ 0.05
HDAC6-225ENST00000483506 UBASH3BQ8TF42 649 aa15.37■□□□□ 0.05
HDAC6-225ENST00000483506 PITX2Q99697 317 aa15.37■□□□□ 0.05
HDAC6-225ENST00000483506 PIMREGQ9BSJ6 248 aa15.37■□□□□ 0.05
HDAC6-225ENST00000483506 POFUT1Q9H488 388 aa15.37■□□□□ 0.05
HDAC6-225ENST00000483506 WDR76Q9H967 626 aa15.37■□□□□ 0.05
HDAC6-225ENST00000483506 STARD10Q9Y365 291 aa15.37■□□□□ 0.05
HDAC6-225ENST00000483506 GRIP1Q9Y3R0 1128 aa15.37■□□□□ 0.05
HDAC6-225ENST00000483506 NCR1O76036 304 aa15.36■□□□□ 0.05
HDAC6-225ENST00000483506 GLCEO94923 617 aa15.36■□□□□ 0.05
HDAC6-225ENST00000483506 MT-ND5P03915 603 aa15.36■□□□□ 0.05
HDAC6-225ENST00000483506 ACSM4P0C7M7 580 aa15.36■□□□□ 0.05
HDAC6-225ENST00000483506 ZNF23P17027 643 aa15.36■□□□□ 0.05
HDAC6-225ENST00000483506 KITLGP21583 273 aa15.36■□□□□ 0.05
HDAC6-225ENST00000483506 OTX1P32242 354 aaPredicted RBP15.36■□□□□ 0.05
HDAC6-225ENST00000483506 LIPAP38571 399 aa15.36■□□□□ 0.05
HDAC6-225ENST00000483506 NR4A2P43354 598 aa15.36■□□□□ 0.05
HDAC6-225ENST00000483506 PSG7Q13046 419 aa15.36■□□□□ 0.05
HDAC6-225ENST00000483506 RIN1Q13671 783 aa15.36■□□□□ 0.05
HDAC6-225ENST00000483506 KPNB1Q14974 876 aaKnown RBP15.36■□□□□ 0.05
HDAC6-225ENST00000483506 ZFP1Q6P2D0 407 aa15.36■□□□□ 0.05
HDAC6-225ENST00000483506 ZNF511Q8NB15 262 aa15.36■□□□□ 0.05
HDAC6-225ENST00000483506 MAPK1IP1LQ8NDC0 245 aa15.36■□□□□ 0.05
HDAC6-225ENST00000483506 ZNF540Q8NDQ6 660 aa15.36■□□□□ 0.05
HDAC6-225ENST00000483506 OR6K6Q8NGW6 343 aa15.36■□□□□ 0.05
HDAC6-225ENST00000483506 APOBEC3DQ96AK3 386 aaPredicted RBP15.36■□□□□ 0.05
HDAC6-225ENST00000483506 C1QTNF5Q9BXJ0 243 aa15.36■□□□□ 0.05
HDAC6-225ENST00000483506 TEX12Q9BXU0 123 aa15.36■□□□□ 0.05
HDAC6-225ENST00000483506 MED20Q9H944 212 aa15.36■□□□□ 0.05
HDAC6-225ENST00000483506 CYSLTR2Q9NS75 346 aa15.36■□□□□ 0.05
HDAC6-225ENST00000483506 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.36■□□□□ 0.05
HDAC6-225ENST00000483506 YLPM1P49750 1951 aaKnown RBP15.36■□□□□ 0.05
HDAC6-225ENST00000483506 HIVEP2P31629 2446 aa15.35■□□□□ 0.05
HDAC6-225ENST00000483506 PRR23D1E9PI22 279 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-225ENST00000483506 H3BNX3 289 aa15.35■□□□□ 0.05
HDAC6-225ENST00000483506 PRODHO43272 600 aa15.35■□□□□ 0.05
HDAC6-225ENST00000483506 HPXP02790 462 aa15.35■□□□□ 0.05
HDAC6-225ENST00000483506 PRR23D2P0DMB1 279 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-225ENST00000483506 RPS27P42677 84 aaKnown RBP15.35■□□□□ 0.05
HDAC6-225ENST00000483506 ALKBH6Q3KRA9 238 aa15.35■□□□□ 0.05
HDAC6-225ENST00000483506 FAM209AQ5JX71 171 aa15.35■□□□□ 0.05
HDAC6-225ENST00000483506 TMEM154Q6P9G4 183 aa15.35■□□□□ 0.05
HDAC6-225ENST00000483506 FBXW12Q6X9E4 464 aa15.35■□□□□ 0.05
HDAC6-225ENST00000483506 OR5L1Q8NGL2 311 aa15.35■□□□□ 0.05
HDAC6-225ENST00000483506 ST7LQ8TDW4 575 aa15.35■□□□□ 0.05
HDAC6-225ENST00000483506 PYDC1Q8WXC3 89 aa15.35■□□□□ 0.05
HDAC6-225ENST00000483506 OSBPL10Q9BXB5 764 aa15.35■□□□□ 0.05
HDAC6-225ENST00000483506 KRT84Q9NSB2 600 aa15.35■□□□□ 0.05
HDAC6-225ENST00000483506 ENOPH1Q9UHY7 261 aa15.35■□□□□ 0.05
HDAC6-225ENST00000483506 TMEFF2Q9UIK5 374 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-225ENST00000483506 FN1P02751 2386 aaKnown RBP15.34■□□□□ 0.05
HDAC6-225ENST00000483506 ZSCAN5BA6NJL1 495 aa15.34■□□□□ 0.05
HDAC6-225ENST00000483506 ZNF593O00488 134 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms