RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 LIFP15018 202 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 MSX1P28360 303 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 TAS2R20P59543 309 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 GLO1Q04760 184 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 RASGEF1BQ0VAM2 473 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 TMEM225Q6GV28 225 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 SPINK14Q6IE38 97 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 PLXDC2Q6UX71 529 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 SEZ6L2Q6UXD5 910 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 BEST3Q8N1M1 668 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 SLC26A10Q8NG04 563 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 OR2T35Q8NGX2 323 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 GPR148Q8TDV2 347 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 THRSPQ92748 146 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 MED30Q96HR3 178 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 SH2D2AQ9NP31 389 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 TMEM9BQ9NQ34 198 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 CEP250Q9BV73 2442 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 OR2M5A3KFT3 312 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 PINLYPA6NC86 204 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 ARPC1BO15143 372 aaKnown RBP12.85□□□□□ -0.35
CHD3-211ENST00000481999 ZNF81P51508 661 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 TGIF1Q15583 401 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 NHLRC1Q6VVB1 395 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 DCXRQ7Z4W1 244 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 OR1J4Q8NGS1 313 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 PSMF1Q92530 271 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 ANGPTL4Q9BY76 406 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 HES7Q9BYE0 225 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 CLEC4MQ9H2X3 399 aaPredicted RBP12.85□□□□□ -0.35
CHD3-211ENST00000481999 NOX3Q9HBY0 568 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 A0A1W2PQ72 361 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 LINC00862A6NCI5 91 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 SULT2B1O00204 365 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 TRAF3IP2O43734 574 aaPredicted RBP12.85□□□□□ -0.35
CHD3-211ENST00000481999 MAS1P04201 325 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 DLX5P56178 289 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 OC90Q02509 493 aaPredicted RBP12.85□□□□□ -0.35
CHD3-211ENST00000481999 LGALSLQ3ZCW2 172 aaPredicted RBP12.85□□□□□ -0.35
CHD3-211ENST00000481999 ACER2Q5QJU3 275 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 NLRC3Q7RTR2 1065 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 TMEM106AQ96A25 262 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 METTL17Q9H7H0 456 aaPredicted RBP12.85□□□□□ -0.35
CHD3-211ENST00000481999 EIF3KQ9UBQ5 218 aaKnown RBP12.85□□□□□ -0.35
CHD3-211ENST00000481999 B3GALT5Q9Y2C3 310 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 LRP12Q9Y561 859 aa12.85□□□□□ -0.35
CHD3-211ENST00000481999 PTPRZ1P23471 2315 aaPredicted RBP12.85□□□□□ -0.35
CHD3-211ENST00000481999 LEUTXA8MZ59 168 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 TNFSF15O95150 251 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 CYC1P08574 325 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 ENPP1P22413 925 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 SELENOPP49908 381 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 RPS15P62841 145 aaKnown RBP12.84□□□□□ -0.35
CHD3-211ENST00000481999 RIPPLY1Q0D2K3 151 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 CDCP2Q5VXM1 449 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 C5orf46Q6UWT4 87 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 GLDNQ6ZMI3 551 aaPredicted RBP12.84□□□□□ -0.35
CHD3-211ENST00000481999 Q6ZTK2 550 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 THOC3Q96J01 351 aaKnown RBP12.84□□□□□ -0.35
CHD3-211ENST00000481999 OR8B4Q96RC9 309 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 UTP23Q9BRU9 249 aaKnown RBP12.84□□□□□ -0.35
CHD3-211ENST00000481999 POTEKPQ9BYX7 375 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 NPDC1Q9NQX5 325 aaPredicted RBP12.84□□□□□ -0.35
CHD3-211ENST00000481999 STEAP1Q9UHE8 339 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 GVINP1Q7Z2Y8 2422 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 ARPC4-TTLL3A0A0A6YYG9 625 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 PROB1E7EW31 1015 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 TNFSF11O14788 317 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 GLSO94925 669 aaPredicted RBP12.84□□□□□ -0.35
CHD3-211ENST00000481999 IFNA7P01567 189 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 CPN1P15169 458 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 STARP49675 285 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 ZP4Q12836 540 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 PLA2G7Q13093 441 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 SSPNQ14714 243 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 SLC17A1Q14916 467 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 SLC25A25Q6KCM7 469 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 DNM1P46Q6ZS02 220 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 KRT77Q7Z794 578 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 UEVLDQ8IX04 471 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 OR8H3Q8N146 312 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 SPICQ8N5J4 248 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 C4orf45Q96LM5 186 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 DCBLD2Q96PD2 775 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 KCNK15Q9H427 330 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 SEC61A2Q9H9S3 476 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 GPN1Q9HCN4 374 aaPredicted RBP12.84□□□□□ -0.35
CHD3-211ENST00000481999 DKKL1Q9UK85 242 aa12.84□□□□□ -0.35
CHD3-211ENST00000481999 A0A1W2PPL8 197 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 PTHLHP12272 177 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 DCTDP32321 178 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 RAD52P43351 418 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 DAP3P51398 398 aaKnown RBP12.83□□□□□ -0.36
CHD3-211ENST00000481999 BLVRAP53004 296 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 CHAF1BQ13112 559 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 ASPHD2Q6ICH7 369 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 SLC18B1Q6NT16 456 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 FDX2Q6P4F2 183 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 LIN37Q96GY3 246 aaPredicted RBP12.83□□□□□ -0.36
CHD3-211ENST00000481999 CENPMQ9NSP4 180 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms