RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 CAV3P56539 151 aa17.23■□□□□ 0.35
CCM2-214ENST00000481194 ZFAND1Q8TCF1 268 aa17.23■□□□□ 0.35
CCM2-214ENST00000481194 DCLRE1CQ96SD1 692 aaKnown RBP17.23■□□□□ 0.35
CCM2-214ENST00000481194 TBX6O95947 436 aaPredicted RBP17.23■□□□□ 0.35
CCM2-214ENST00000481194 IDH3GP51553 393 aaPredicted RBP17.23■□□□□ 0.35
CCM2-214ENST00000481194 ZNF121P58317 390 aaPredicted RBP17.23■□□□□ 0.35
CCM2-214ENST00000481194 PPP1R32Q7Z5V6 425 aa17.23■□□□□ 0.35
CCM2-214ENST00000481194 SPACA1Q9HBV2 294 aa17.23■□□□□ 0.35
CCM2-214ENST00000481194 FOXJ2Q9P0K8 574 aa17.23■□□□□ 0.35
CCM2-214ENST00000481194 H7C417 338 aa17.23■□□□□ 0.35
CCM2-214ENST00000481194 PTP4A3O75365 173 aa17.23■□□□□ 0.35
CCM2-214ENST00000481194 RECKO95980 971 aa17.23■□□□□ 0.35
CCM2-214ENST00000481194 ARF1P84077 181 aaKnown RBP17.23■□□□□ 0.35
CCM2-214ENST00000481194 GLIPR1L1Q6UWM5 242 aa17.23■□□□□ 0.35
CCM2-214ENST00000481194 ISG20L2Q9H9L3 353 aaKnown RBP17.23■□□□□ 0.35
CCM2-214ENST00000481194 SEMA5BQ9P283 1151 aa17.23■□□□□ 0.35
CCM2-214ENST00000481194 A0A096LPE4 126 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 CENPVL1A0A0U1RR11 272 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 A0A1W2PPZ6 126 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 OR14I1A6ND48 311 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 SLC2A1P11166 492 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 CDONQ4KMG0 1287 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 MRPL14Q6P1L8 145 aaKnown RBP17.22■□□□□ 0.35
CCM2-214ENST00000481194 SULF2Q8IWU5 870 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 OR5M9Q8NGP3 310 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 PP6455Q8WZ26 134 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 ST6GALNAC5Q9BVH7 336 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 MRPL15Q9P015 296 aaKnown RBP17.22■□□□□ 0.35
CCM2-214ENST00000481194 ZNF175Q9Y473 711 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 PTH2RP49190 550 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 MESTQ5EB52 335 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 SFRP4Q6FHJ7 346 aaPredicted RBP17.22■□□□□ 0.35
CCM2-214ENST00000481194 LAX1Q8IWV1 398 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 OR10A4Q9H209 315 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 DECR2Q9NUI1 292 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 NLKQ9UBE8 527 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 LIMS1P48059 325 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 VEGFCP49767 419 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 KNL1Q8NG31 2342 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 RANBP3Q9H6Z4 567 aaPredicted RBP17.22■□□□□ 0.35
CCM2-214ENST00000481194 C13orf42A0A1B0GVH6 325 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 OIP5O43482 229 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 PLPP2O43688 288 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 SLC34A2O95436 690 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 DDOSTP39656 456 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 OR8G1Q15617 311 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 EIF5AL1Q6IS14 154 aaKnown RBP17.22■□□□□ 0.35
CCM2-214ENST00000481194 VHLLQ6RSH7 139 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 GRPEL2Q8TAA5 225 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 SELENOIQ9C0D9 397 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 SCPEP1Q9HB40 452 aa17.22■□□□□ 0.35
CCM2-214ENST00000481194 ANKRD61A6NGH8 418 aa17.21■□□□□ 0.35
CCM2-214ENST00000481194 NKX6-3A6NJ46 265 aa17.21■□□□□ 0.35
CCM2-214ENST00000481194 CDK2P24941 298 aa17.21■□□□□ 0.35
CCM2-214ENST00000481194 CD83Q01151 205 aa17.21■□□□□ 0.35
CCM2-214ENST00000481194 FABP5Q01469 135 aa17.21■□□□□ 0.35
CCM2-214ENST00000481194 ZNF718Q3SXZ3 478 aa17.21■□□□□ 0.35
CCM2-214ENST00000481194 SSX8Q7RTT4 187 aa17.21■□□□□ 0.35
CCM2-214ENST00000481194 CD59P13987 128 aa17.21■□□□□ 0.35
CCM2-214ENST00000481194 FGF9P31371 208 aaPredicted RBP17.21■□□□□ 0.35
CCM2-214ENST00000481194 NUFIP2Q7Z417 695 aaKnown RBP17.21■□□□□ 0.35
CCM2-214ENST00000481194 ZNF573Q86YE8 665 aa17.21■□□□□ 0.35
CCM2-214ENST00000481194 NPEPL1Q8NDH3 523 aa17.21■□□□□ 0.35
CCM2-214ENST00000481194 CMTM3Q96MX0 182 aa17.21■□□□□ 0.35
CCM2-214ENST00000481194 GPX7Q96SL4 187 aaPredicted RBP17.21■□□□□ 0.35
CCM2-214ENST00000481194 BCO1Q9HAY6 547 aa17.21■□□□□ 0.35
CCM2-214ENST00000481194 UBE2J1Q9Y385 318 aaPredicted RBP17.21■□□□□ 0.35
CCM2-214ENST00000481194 SSX6Q7RTT6 188 aa17.21■□□□□ 0.35
CCM2-214ENST00000481194 HGDQ93099 445 aa17.21■□□□□ 0.35
CCM2-214ENST00000481194 CLEC2LP0C7M8 214 aa17.21■□□□□ 0.34
CCM2-214ENST00000481194 CDAP32320 146 aa17.21■□□□□ 0.34
CCM2-214ENST00000481194 CXADRP78310 365 aa17.21■□□□□ 0.34
CCM2-214ENST00000481194 IKZF1Q13422 519 aa17.21■□□□□ 0.34
CCM2-214ENST00000481194 TMEM81Q6P7N7 255 aa17.21■□□□□ 0.34
CCM2-214ENST00000481194 Q6ZTK2 550 aa17.21■□□□□ 0.34
CCM2-214ENST00000481194 PLPP7Q8NBV4 271 aa17.21■□□□□ 0.34
CCM2-214ENST00000481194 CHPT1Q8WUD6 406 aa17.21■□□□□ 0.34
CCM2-214ENST00000481194 PIGTQ969N2 578 aa17.21■□□□□ 0.34
CCM2-214ENST00000481194 ZNF816-ZNF321PA0A0X1KG74 233 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 ASAH2BP0C7U1 165 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 ANGPTL5Q86XS5 388 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 DMRTB1Q96MA1 342 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 PHB2Q99623 299 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 AMDHD2Q9Y303 409 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 NRASP01111 189 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 CD34P28906 385 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 S100A10P60903 97 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 PMPCAQ10713 525 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 TBC1D24Q9ULP9 559 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 EDARQ9UNE0 448 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 ECI1P42126 302 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 ACSM1Q08AH1 577 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 ZNF770Q6IQ21 691 aaPredicted RBP17.2■□□□□ 0.34
CCM2-214ENST00000481194 SGPP2Q8IWX5 399 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 RNF170Q96K19 258 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 MRPS18BQ9Y676 258 aaKnown RBP17.2■□□□□ 0.34
CCM2-214ENST00000481194 A0A1W2PQ09 198 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 OR7C1O76099 320 aaPredicted RBP17.2■□□□□ 0.34
CCM2-214ENST00000481194 DXOO77932 396 aaKnown RBP17.2■□□□□ 0.34
CCM2-214ENST00000481194 TXNDC12O95881 172 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms