RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 TRIM64BA6NI03 449 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 LY6HO94772 140 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 FARS2O95363 451 aaKnown RBP10.54□□□□□ -0.72
PTPRF-213ENST00000481019 CST2P09228 141 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 OR4A8P0C604 315 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 GAAP10253 952 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 PSKH1P11801 424 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 NPR2P20594 1047 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 MSR1P21757 451 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 NR4A1P22736 598 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 RPL5P46777 297 aaKnown RBP10.54□□□□□ -0.72
PTPRF-213ENST00000481019 ATP5J2P56134 94 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 SLC35A2P78381 396 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 SNTB2Q13425 540 aaKnown RBP10.54□□□□□ -0.72
PTPRF-213ENST00000481019 BLMHQ13867 455 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 MEP1BQ16820 701 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 SLC36A2Q495M3 483 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 AGAP6Q5VW22 663 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 ZNF774Q6NX45 483 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 TMEM53Q6P2H8 277 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 LRP11Q86VZ4 500 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 EGFL6Q8IUX8 553 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 CYB561A3Q8NBI2 242 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 SLC30A7Q8NEW0 376 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 OR4F15Q8NGB8 312 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 APH1BQ8WW43 257 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 C11orf40Q8WZ69 217 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 FCGR1BQ92637 280 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 TMEM80Q96HE8 168 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 KCNS3Q9BQ31 491 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 OR2H1Q9GZK4 316 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 CCDC90BQ9GZT6 254 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 OR51B6Q9H340 312 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 CXorf56Q9H5V9 222 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 SRA1Q9HD15 236 aaKnown RBP10.54□□□□□ -0.72
PTPRF-213ENST00000481019 DLL4Q9NR61 685 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 MYEF2Q9P2K5 600 aaKnown RBP10.54□□□□□ -0.72
PTPRF-213ENST00000481019 B9D1Q9UPM9 204 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 ERGIC3Q9Y282 383 aa10.54□□□□□ -0.72
PTPRF-213ENST00000481019 NF1P21359 2839 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 XPNPEP2O43895 674 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 KHDRBS3O75525 346 aaKnown RBP10.53□□□□□ -0.72
PTPRF-213ENST00000481019 FAM157BP0CG42 384 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 DBTP11182 482 aaKnown RBP10.53□□□□□ -0.72
PTPRF-213ENST00000481019 MYL12AP19105 171 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 PAX7P23759 505 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 SERPINF1P36955 418 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 WNT5AP41221 380 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 GUCA1AP43080 201 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-213ENST00000481019 ERVS71-1P61550 626 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 RPS7P62081 194 aaKnown RBP10.53□□□□□ -0.72
PTPRF-213ENST00000481019 ST3GAL4Q11206 333 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 KLHL12Q53G59 568 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 TMEM255AQ5JRV8 349 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 RNLSQ5VYX0 342 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 PLBD1Q6P4A8 553 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 LYPD4Q6UWN0 246 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-213ENST00000481019 SLC37A3Q8NCC5 494 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 GGHQ92820 318 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 POM121L2Q96KW2 1035 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 Q96MF0 132 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 TEAD3Q99594 435 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 MRPL37Q9BZE1 423 aaKnown RBP10.53□□□□□ -0.72
PTPRF-213ENST00000481019 RACGAP1Q9H0H5 632 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 MOV10Q9HCE1 1003 aaKnown RBP10.53□□□□□ -0.72
PTPRF-213ENST00000481019 RPRD1BQ9NQG5 326 aaKnown RBP10.53□□□□□ -0.72
PTPRF-213ENST00000481019 INPP5EQ9NRR6 644 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 DNAJC27Q9NZQ0 273 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 FKBP7Q9Y680 259 aa10.53□□□□□ -0.72
PTPRF-213ENST00000481019 TRIM64CA6NLI5 447 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 GLCEO94923 617 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 TFP02787 698 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 CDK1P06493 297 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 PYCR1P32322 319 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 SLC15A1P46059 708 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 ACTC1P68032 377 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 ACTA1P68133 377 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 HSF2Q03933 536 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 ZNF91Q05481 1191 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 CRMP1Q14194 572 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 SHEQ5VZ18 495 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 AHSA2Q719I0 299 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 ZBTB46Q86UZ6 589 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 GLB1L2Q8IW92 636 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 ZNF101Q8IZC7 436 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 ZCCHC24Q8N2G6 241 aaKnown RBP10.52□□□□□ -0.73
PTPRF-213ENST00000481019 IL17RDQ8NFM7 739 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 SLC7A6Q92536 515 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 PTP4A1Q93096 173 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 RNFT2Q96EX2 444 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 MNTQ99583 582 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 DOK1Q99704 481 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 SMR3AQ99954 134 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 CDCA4Q9BXL8 241 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 OR51V1Q9H2C8 321 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 PLK3Q9H4B4 646 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 ZNF442Q9H7R0 627 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 FGF20Q9NP95 211 aaPredicted RBP10.52□□□□□ -0.73
PTPRF-213ENST00000481019 HINT3Q9NQE9 182 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms