RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 PPP1R3DO95685 299 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 RHCEP18577 417 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 FPR2P25090 351 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 OMPP47874 163 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 SEC61A1P61619 476 aaKnown RBP12.85□□□□□ -0.35
LIMS3-203ENST00000480744 HLXQ14774 488 aaPredicted RBP12.85□□□□□ -0.35
LIMS3-203ENST00000480744 ZMYND11Q15326 602 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 SEC23BQ15437 767 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 MEP1BQ16820 701 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 ARMCX4Q5H9R4 360 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 DNM1P34Q6PK57 102 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 DPY19L2P2Q6ZN68 376 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 RNF148Q8N7C7 305 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 ZNF283Q8N7M2 679 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 FAM86B1Q8N7N1 296 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 CCDC197Q8NCU1 140 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 TSSK2Q96PF2 358 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 GPX7Q96SL4 187 aaPredicted RBP12.85□□□□□ -0.35
LIMS3-203ENST00000480744 PLA2G12AQ9BZM1 189 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 PATZ1Q9HBE1 687 aaKnown RBP12.85□□□□□ -0.35
LIMS3-203ENST00000480744 MMP26Q9NRE1 261 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 ABCD2Q9UBJ2 740 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 IL19Q9UHD0 177 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 TAGLN3Q9UI15 199 aa12.85□□□□□ -0.35
LIMS3-203ENST00000480744 SAMD4AQ9UPU9 718 aaKnown RBP12.85□□□□□ -0.35
LIMS3-203ENST00000480744 TMEM89A2RUT3 159 aa12.84□□□□□ -0.35
LIMS3-203ENST00000480744 RAC2P15153 192 aa12.84□□□□□ -0.35
LIMS3-203ENST00000480744 CDKN2AP42771 156 aaKnown RBP12.84□□□□□ -0.35
LIMS3-203ENST00000480744 RGS6P49758 472 aa12.84□□□□□ -0.35
LIMS3-203ENST00000480744 FXYD6P3P58550 94 aa12.84□□□□□ -0.35
LIMS3-203ENST00000480744 TMEM155Q4W5P6 130 aa12.84□□□□□ -0.35
LIMS3-203ENST00000480744 OR2T2Q6IF00 324 aa12.84□□□□□ -0.35
LIMS3-203ENST00000480744 SMARCD3Q6STE5 483 aa12.84□□□□□ -0.35
LIMS3-203ENST00000480744 JAZF1Q86VZ6 243 aa12.84□□□□□ -0.35
LIMS3-203ENST00000480744 OR10AD1Q8NGE0 317 aa12.84□□□□□ -0.35
LIMS3-203ENST00000480744 OR5L1Q8NGL2 311 aa12.84□□□□□ -0.35
LIMS3-203ENST00000480744 FANK1Q8TC84 345 aa12.84□□□□□ -0.35
LIMS3-203ENST00000480744 C7orf34Q96L11 122 aa12.84□□□□□ -0.35
LIMS3-203ENST00000480744 ERMAPQ96PL5 475 aaPredicted RBP12.84□□□□□ -0.35
LIMS3-203ENST00000480744 SPAG4Q9NPE6 437 aa12.84□□□□□ -0.35
LIMS3-203ENST00000480744 ESM1Q9NQ30 184 aa12.84□□□□□ -0.35
LIMS3-203ENST00000480744 DCAF13Q9NV06 445 aaKnown RBP12.84□□□□□ -0.35
LIMS3-203ENST00000480744 PPIAL4AQ9Y536 164 aa12.84□□□□□ -0.35
LIMS3-203ENST00000480744 PPIAL4EA0A075B759 164 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 PPIAL4CA0A0B4J2A2 164 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 IGHV3-64DA0A0J9YX35 117 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 PPIAL4DF5H284 164 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 FSHBP01225 129 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 PPIAL4FP0DN26 164 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 CRABP1P29762 137 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 MDH2P40926 338 aaKnown RBP12.83□□□□□ -0.36
LIMS3-203ENST00000480744 MMP16P51512 607 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 SPIBQ01892 262 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 KCNMB1Q16558 191 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 LEG1Q6P5S2 330 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 PGM2L1Q6PCE3 622 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 CORO6Q6QEF8 472 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 RBMS3Q6XE24 437 aaKnown RBP12.83□□□□□ -0.36
LIMS3-203ENST00000480744 LRRC28Q86X40 367 aaPredicted RBP12.83□□□□□ -0.36
LIMS3-203ENST00000480744 BHLHE23Q8NDY6 225 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 DEFB108BQ8NET1 73 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 GJC3Q8NFK1 279 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 ZNF420Q8TAQ5 688 aaPredicted RBP12.83□□□□□ -0.36
LIMS3-203ENST00000480744 BCAS4Q8TDM0 211 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 APOBEC3DQ96AK3 386 aaPredicted RBP12.83□□□□□ -0.36
LIMS3-203ENST00000480744 ZNF582Q96NG8 517 aaPredicted RBP12.83□□□□□ -0.36
LIMS3-203ENST00000480744 SIGLEC11Q96RL6 698 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 GPA33Q99795 319 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 HDHD2Q9H0R4 259 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 SRA1Q9HD15 236 aaKnown RBP12.83□□□□□ -0.36
LIMS3-203ENST00000480744 ATPIF1Q9UII2 106 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 AUP1Q9Y679 476 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 LHFPL6Q9Y693 200 aa12.83□□□□□ -0.36
LIMS3-203ENST00000480744 TRAPPC2LH3BP13 241 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 TMEM178BH3BS89 294 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 J3QW42 95 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 DCTN6O00399 190 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 ZNF205O95201 554 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 TXNDC12O95881 172 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 RENP00797 406 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 T-ENOLP0DO92 83 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 SLC6A6P31641 620 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 SLC6A9P48067 706 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 COMPP49747 757 aaPredicted RBP12.82□□□□□ -0.36
LIMS3-203ENST00000480744 DBPQ10586 325 aaPredicted RBP12.82□□□□□ -0.36
LIMS3-203ENST00000480744 ZNF154Q13106 437 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 ESCO2Q56NI9 601 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 SLC27A4Q6P1M0 643 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 FBXW12Q6X9E4 464 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 LINC00346Q8IVM7 164 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 MUC20Q8N307 709 aaPredicted RBP12.82□□□□□ -0.36
LIMS3-203ENST00000480744 SIGLECL1Q8N7X8 197 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 ZDHHC22Q8N966 263 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 OR8G5Q8NG78 346 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 OR13G1Q8NGZ3 307 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 POP5Q969H6 163 aaKnown RBP12.82□□□□□ -0.36
LIMS3-203ENST00000480744 MEGF10Q96KG7 1140 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 NMNAT3Q96T66 252 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 COQ7Q99807 217 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 MRI1Q9BV20 369 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms