RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 POM121L2Q96KW2 1035 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 ZNF570Q96NI8 536 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 GPA33Q99795 319 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 COQ7Q99807 217 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 CHID1Q9BWS9 393 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 NMNAT2Q9BZQ4 307 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 HDHD2Q9H0R4 259 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 OR52D1Q9H346 318 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 LIME1Q9H400 295 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 FN3KQ9H479 309 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 OPA3Q9H6K4 179 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 REEP1Q9H902 201 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 ELOVL3Q9HB03 270 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 POLE4Q9NR33 117 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 CMC2Q9NRP2 79 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 DDX28Q9NUL7 540 aaKnown RBP4.21□□□□□ -1.74
PTCD3-213ENST00000480102 DNAJB9Q9UBS3 223 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 KLHL21Q9UJP4 597 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 POU2F3Q9UKI9 436 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 MOKQ9UQ07 419 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 AURKCQ9UQB9 309 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 LAMP3Q9UQV4 416 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 POMPQ9Y244 141 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 CMAHPQ9Y471 501 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 F8P00451 2351 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 ITPR3Q14573 2671 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 NF1P21359 2839 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 HCFC1P51610 2035 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 NCKAP5O14513 1909 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 ANK3Q12955 4377 aaKnown RBP4.2□□□□□ -1.74
PTCD3-213ENST00000480102 ABCA2Q9BZC7 2435 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 ZNF469Q96JG9 3925 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-213ENST00000480102 TRAV27A0A087WT01 109 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 A0A096LNT2 108 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 IGLV1-36A0A0B4J1U3 117 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 VWC2LB2RUY7 222 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 C11orf98E9PRG8 122 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 ATP6V1G2-DDX39BF2Z307 99 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 M0R1B8 84 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 KPNA4O00629 521 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-213ENST00000480102 TLX2O43763 284 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-213ENST00000480102 OR10H3O60404 316 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 E2F6O75461 281 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 CCNB2O95067 398 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 PLAUP00749 431 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 IFNGP01579 166 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 HLA-HP01893 362 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 HMGN1P05114 100 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 CD55P08174 381 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 OR4A8P0C604 315 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 GAAP10253 952 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 B4GALT1P15291 398 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 ATP6V1B2P21281 511 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 CBLP22681 906 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 STOMP27105 288 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 CALCRP30988 508 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 DCTDP32321 178 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 MSX2P35548 267 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-213ENST00000480102 ACVR1BP36896 505 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 FABP6P51161 128 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 UCP2P55851 309 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 ATP5J2P56134 94 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 TMEM33P57088 247 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 ESRRGP62508 458 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 MXRA7P84157 204 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 GALK2Q01415 458 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 IL1RL1Q01638 556 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 SPIBQ01892 262 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 HSF2Q03933 536 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 LGALS3BPQ08380 585 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 DAG1Q14118 895 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 ENDOGQ14249 297 aaKnown RBP4.2□□□□□ -1.74
PTCD3-213ENST00000480102 RAB35Q15286 201 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 Q5PR19 223 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 ZNF362Q5T0B9 420 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-213ENST00000480102 FAHD1Q6P587 224 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 CRIP3Q6Q6R5 217 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 TBPL2Q6SJ96 375 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 FBXW12Q6X9E4 464 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 B3GLCTQ6Y288 498 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 KLBQ86Z14 1044 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 WDFY1Q8IWB7 410 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 RNF148Q8N7C7 305 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 CPEB3Q8NE35 698 aaKnown RBP4.2□□□□□ -1.74
PTCD3-213ENST00000480102 SLC30A7Q8NEW0 376 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 WFDC11Q8NEX6 87 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 GJC3Q8NFK1 279 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 SLC26A10Q8NG04 563 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 OR52L1Q8NGH7 329 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 OR13C2Q8NGS9 318 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 OR2T4Q8NH00 348 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 OR51A7Q8NH64 312 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 CANT1Q8WVQ1 401 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 GCDHQ92947 438 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-213ENST00000480102 RASD2Q96D21 266 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 FBXO17Q96EF6 278 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 CLPTM1LQ96KA5 538 aa4.2□□□□□ -1.74
PTCD3-213ENST00000480102 RBM4Q9BWF3 364 aaKnown RBP4.2□□□□□ -1.74
PTCD3-213ENST00000480102 CADM1Q9BY67 442 aaKnown RBP4.2□□□□□ -1.74
PTCD3-213ENST00000480102 OR2H1Q9GZK4 316 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms