RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 CD37P11049 281 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 ATF1P18846 271 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 CCL1P22362 96 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 OTX1P32242 354 aaPredicted RBP9.7□□□□□ -0.86
VTI1A-204ENST00000480057 NTF4P34130 210 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 TALDO1P37837 337 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 SOX2P48431 317 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 DEFA1P59665 94 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 DEFA3P59666 94 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 IFITM3Q01628 133 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 RAB35Q15286 201 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 ZNF79Q15937 498 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 SLC25A35Q3KQZ1 300 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 ELFN2Q5R3F8 820 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 CNIH2Q6PI25 160 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 FAM131AQ6UXB0 335 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 MCEMP1Q8IX19 187 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 OR10AC1Q8NH08 325 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 FNDC9Q8TBE3 224 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 TRMT10AQ8TBZ6 339 aaKnown RBP9.7□□□□□ -0.86
VTI1A-204ENST00000480057 ASB5Q8WWX0 329 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 SDHCQ99643 169 aaPredicted RBP9.7□□□□□ -0.86
VTI1A-204ENST00000480057 FOXB1Q99853 325 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 PPP1R3EQ9H7J1 279 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 SP140LQ9H930 580 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 CRLF2Q9HC73 371 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 ATPIF1Q9UII2 106 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 GTF2A1LQ9UNN4 478 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 MSRB2Q9Y3D2 182 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 AK6Q9Y3D8 172 aaKnown RBP9.7□□□□□ -0.86
VTI1A-204ENST00000480057 CSAG2Q9Y5P2 127 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 ETV7Q9Y603 341 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 MED12Q93074 2177 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 ZFHX2Q9C0A1 2572 aaPredicted RBP9.69□□□□□ -0.86
VTI1A-204ENST00000480057 FARS2O95363 451 aaKnown RBP9.69□□□□□ -0.86
VTI1A-204ENST00000480057 TTRP02766 147 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 ACSM4P0C7M7 580 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 IGFBP3P17936 291 aaPredicted RBP9.69□□□□□ -0.86
VTI1A-204ENST00000480057 NR4A2P43354 598 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 CX3CR1P49238 355 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 CAPZA1P52907 286 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 OXA1LQ15070 435 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 CEACAM16Q2WEN9 425 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 KRTAP27-1Q3LI81 207 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 CCDC92Q53HC0 331 aaPredicted RBP9.69□□□□□ -0.86
VTI1A-204ENST00000480057 DCDC5Q6ZRR9 648 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 Q6ZS92 163 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 ABHD12BQ7Z5M8 362 aaPredicted RBP9.69□□□□□ -0.86
VTI1A-204ENST00000480057 DPPA2Q7Z7J5 298 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 ADGRE4PQ86SQ3 457 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 RDH10Q8IZV5 341 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 CENPSQ8N2Z9 138 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 NKAIN3Q8N8D7 197 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 OR51A4Q8NGJ6 313 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 OR13C3Q8NGS6 347 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 SPTSSAQ969W0 71 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 APH1AQ96BI3 265 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 SARAFQ96BY9 339 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 COX4I2Q96KJ9 171 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 GFI1Q99684 422 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 ABCB10Q9NRK6 738 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 TIMM10BQ9Y5J6 103 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 WDFY3Q8IZQ1 3526 aa9.69□□□□□ -0.86
VTI1A-204ENST00000480057 TRAV8-7A0A075B6U6 113 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 A0A087WV48 116 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 A0A0U1RQV5 110 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 A0A1B0GVI7 797 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 OR14I1A6ND48 311 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 SLC22A20A6NK97 555 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 ANXA2P2A6NMY6 339 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 FAM25AB3EWG3 89 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 FAM25CB3EWG5 89 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 FAM25GB3EWG6 89 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 ZNF587BE7ETH6 402 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 KRT33AO76009 404 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 PTTG1O95997 202 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 IGLV3-1P01715 115 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 HLA-DQB1P01920 261 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 ANXA2P07355 339 aaKnown RBP9.68□□□□□ -0.86
VTI1A-204ENST00000480057 ELK1P19419 428 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 ZNF121P58317 390 aaPredicted RBP9.68□□□□□ -0.86
VTI1A-204ENST00000480057 SF3B4Q15427 424 aaKnown RBP eCLIP9.68□□□□□ -0.86
VTI1A-204ENST00000480057 TRIM16LQ309B1 348 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 UBE2NLQ5JXB2 153 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 TSPO2Q5TGU0 170 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 HACD4Q5VWC8 232 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 STEAP3Q658P3 488 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 PYHIN1Q6K0P9 492 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 DRAM2Q6UX65 266 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 Q6ZSR3 168 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 LINGO2Q7L985 606 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 PRSS45Q7RTY3 260 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 FGD2Q7Z6J4 655 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 SIAH3Q8IW03 269 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 TUSC5Q8IXB3 177 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 SLC22A24Q8N4F4 322 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 ZNF283Q8N7M2 679 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 SAMD12Q8N8I0 201 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 ITFG2Q969R8 447 aa9.68□□□□□ -0.86
VTI1A-204ENST00000480057 FOXRED1Q96CU9 486 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms