RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ASAH2BP0C7U1 165 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 DBTP11182 482 aaKnown RBP5.46□□□□□ -1.54
SF3B1-209ENST00000479532 PSKH1P11801 424 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 BMP5P22003 454 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 FPR3P25089 353 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 AGTR1P30556 359 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 RPL4P36578 427 aaKnown RBP5.46□□□□□ -1.54
SF3B1-209ENST00000479532 GPR4P46093 362 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 DAP3P51398 398 aaKnown RBP5.46□□□□□ -1.54
SF3B1-209ENST00000479532 CDH15P55291 814 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 SIRPAP78324 504 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 H3F3AP84243 136 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 POU3F1Q03052 451 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-209ENST00000479532 ZP4Q12836 540 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 MICAQ29983 383 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF404Q494X3 552 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 IQCCQ4KMZ1 466 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 KLHL12Q53G59 568 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 ALG10Q5BKT4 473 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 IGSF11Q5DX21 431 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 ARMCX4Q5H9R4 360 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 OR7E24Q6IFN5 339 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 RPL13AP3Q6NVV1 102 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 TBPL2Q6SJ96 375 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 CASP12Q6UXS9 341 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 TMPRSS11FQ6ZWK6 438 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 SLC46A3Q7Z3Q1 461 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 ABHD12BQ7Z5M8 362 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-209ENST00000479532 GALNT5Q7Z7M9 940 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 MRGPRGQ86SM5 289 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 HIPK1Q86Z02 1210 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF100Q8IYN0 542 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 GCNT2Q8N0V5 402 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 SVOPLQ8N434 492 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 RPRMLQ8N4K4 120 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 EIF4E3Q8N5X7 224 aaKnown RBP5.46□□□□□ -1.54
SF3B1-209ENST00000479532 ATG16L2Q8NAA4 619 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 OR10G2Q8NGC3 310 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 OR9K2Q8NGE7 335 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 OR52L1Q8NGH7 329 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 OR5K1Q8NHB7 308 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 SSC4DQ8WTU2 575 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 ABHD3Q8WU67 409 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 LIPHQ8WWY8 451 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 CFHR4Q92496 578 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 YIPF5Q969M3 257 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 SLCO4A1Q96BD0 722 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 YIPF6Q96EC8 236 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 HYLS1Q96M11 299 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 DOCK7Q96N67 2140 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF416Q9BWM5 594 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 TEX12Q9BXU0 123 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 ENKD1Q9H0I2 346 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 B3GAT2Q9NPZ5 323 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 MEPEQ9NQ76 525 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-209ENST00000479532 IFT46Q9NQC8 304 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 PDP1Q9P0J1 537 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-209ENST00000479532 UPB1Q9UBR1 384 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 ENOPH1Q9UHY7 261 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 ELF5Q9UKW6 265 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-209ENST00000479532 CLEC4AQ9UMR7 237 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 STUB1Q9UNE7 303 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 RNF6Q9Y252 685 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 ORC6Q9Y5N6 252 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 SNX5Q9Y5X3 404 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 MED12Q93074 2177 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 A0A075B6Q4 140 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 IGKV3D-15A0A087WSY6 115 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 A0A0X1KG70 313 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 LOC102725191A0A1B0GVB3 256 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 UNC119BA6NIH7 251 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 METTL15A6NJ78 407 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 LRRN3E7EW58 273 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 G3V2T6 193 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 GMDSO60547 372 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 ZG16O60844 167 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 SLC43A1O75387 559 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 NDUFB2O95178 105 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 CLDN14O95500 239 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 ADAP00813 363 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 NR2C1P13056 603 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 ANXA8P13928 327 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 MAKP20794 623 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 C4BPBP20851 252 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 OMPP47874 163 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 GDI2P50395 445 aaKnown RBP5.45□□□□□ -1.54
SF3B1-209ENST00000479532 ASCL1P50553 236 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 SLURP1P55000 103 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 CLDN17P56750 224 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 RAB4BP61018 213 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 ADORA2A-AS1P86434 159 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 LTBQ06643 244 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 RPL18Q07020 188 aaKnown RBP5.45□□□□□ -1.54
SF3B1-209ENST00000479532 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.45□□□□□ -1.54
SF3B1-209ENST00000479532 TSPAN31Q12999 210 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 AQP6Q13520 282 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF273Q14593 569 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 SLC17A1Q14916 467 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 SEC23BQ15437 767 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 HSD17B12Q53GQ0 312 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms