RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 MAP2K6P52564 334 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 ACSM1Q08AH1 577 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 SLC17A1Q14916 467 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 STAC2Q6ZMT1 411 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 ALPK2Q86TB3 2170 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 ANGPTL5Q86XS5 388 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 SLC30A7Q8NEW0 376 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 MIB2Q96AX9 1013 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 C14orf79Q96F83 325 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 PELI1Q96FA3 418 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 SIGLEC11Q96RL6 698 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 A0A0U1RQK1 487 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 ENPP1P22413 925 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 ABCD3P28288 659 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 APLNRP35414 380 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 PSG6Q00889 435 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 RTL6Q6ICC9 239 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 TMEM81Q6P7N7 255 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 CYSLTR2Q9NS75 346 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 C19orf12Q9NSK7 152 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 TAS2R4Q9NYW5 299 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 FITM1A5D6W6 292 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 VSTM5A8MXK1 200 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 CYR61O00622 381 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 NRG2O14511 850 aaPredicted RBP12.98□□□□□ -0.33
COL20A1-206ENST00000479501 GPR171O14626 319 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 PLPP2O43688 288 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 NTN1O95631 604 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 BLVRBP30043 206 aaPredicted RBP12.98□□□□□ -0.33
COL20A1-206ENST00000479501 DOC2BQ14184 412 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 ZNF141Q15928 474 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 OR1L3Q8NH93 324 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 ANKRD9Q96BM1 317 aaPredicted RBP12.98□□□□□ -0.33
COL20A1-206ENST00000479501 SLAMF6Q96DU3 332 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 UTP23Q9BRU9 249 aaKnown RBP12.98□□□□□ -0.33
COL20A1-206ENST00000479501 VN1R1Q9GZP7 353 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 ASH2LQ9UBL3 628 aa12.98□□□□□ -0.33
COL20A1-206ENST00000479501 MBTPS2O43462 519 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 GALP22466 123 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 PLCXD3Q63HM9 321 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 TEX261Q6UWH6 196 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 TTC9Q92623 222 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 ZNF768Q9H5H4 540 aaKnown RBP12.97□□□□□ -0.33
COL20A1-206ENST00000479501 U3KQ87 197 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 HSPB2A8KAH6 182 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 IMPA2O14732 288 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 VAMP5O95183 116 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 NAGAP17050 411 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 HSPB2Q16082 182 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 MOB3CQ70IA8 216 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 MRPL41Q8IXM3 137 aaKnown RBP12.97□□□□□ -0.33
COL20A1-206ENST00000479501 FAM213BQ8TBF2 198 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 NMNAT2Q9BZQ4 307 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 METTL9Q9H1A3 318 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 SLCO1C1Q9NYB5 712 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 KIF25Q9UIL4 384 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 PURGQ9UJV8 347 aaKnown RBP12.97□□□□□ -0.33
COL20A1-206ENST00000479501 FOLR1P15328 257 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 TGFBR3Q03167 851 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 SNTB1Q13884 538 aaKnown RBP12.97□□□□□ -0.33
COL20A1-206ENST00000479501 AANATQ16613 207 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 OR10K2Q6IF99 312 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 CBLN3Q6UW01 205 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 NPSR1Q6W5P4 371 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 C12orf57Q99622 126 aa12.97□□□□□ -0.33
COL20A1-206ENST00000479501 WDR81Q562E7 1941 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 OR6C68A6NDL8 312 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 TTLL8A6PVC2 850 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 PPP1R2P9O14990 202 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 ITGB2P05107 769 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 CYB561P49447 251 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 PMPCAQ10713 525 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 LANCL3Q6ZV70 420 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 MKXQ8IYA7 352 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 RELL2Q8NC24 303 aaPredicted RBP12.96□□□□□ -0.33
COL20A1-206ENST00000479501 MRGPRX4Q96LA9 322 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 B3GALNT1O75752 331 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 QDPRP09417 244 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 MAGEB1P43366 347 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 ZNF117Q03924 483 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.96□□□□□ -0.33
COL20A1-206ENST00000479501 ZNF611Q8N823 705 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 OR52H1Q8NGJ2 320 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 OR52N5Q8NH56 324 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 CPT1CQ8TCG5 803 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 LIN37Q96GY3 246 aaPredicted RBP12.96□□□□□ -0.33
COL20A1-206ENST00000479501 GPA33Q99795 319 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 CMSS1Q9BQ75 279 aaKnown RBP12.96□□□□□ -0.33
COL20A1-206ENST00000479501 OCSTAMPQ9BR26 566 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 SLC22A11Q9NSA0 550 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 CCDC163A0A0D9SF12 145 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 NDUFA6P56556 154 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 NXPH1P58417 271 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 TAS2R46P59540 309 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 GRB2P62993 217 aaKnown RBP12.96□□□□□ -0.33
COL20A1-206ENST00000479501 UBE2IP63279 158 aaKnown RBP12.96□□□□□ -0.33
COL20A1-206ENST00000479501 IRF3Q14653 427 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 ACTBL2Q562R1 376 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 UBALD2Q8IYN6 164 aa12.96□□□□□ -0.33
COL20A1-206ENST00000479501 SLC25A31Q9H0C2 315 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms