RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 CELA2AP08217 269 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 PPP3CBP16298 524 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 AFF3P51826 1226 aaKnown RBP9.64□□□□□ -0.87
VPS52-217ENST00000478934 SMAD4Q13485 552 aaKnown RBP9.64□□□□□ -0.87
VPS52-217ENST00000478934 PAPD4Q6PIY7 484 aaKnown RBP9.64□□□□□ -0.87
VPS52-217ENST00000478934 H1FNTQ75WM6 255 aaPredicted RBP9.64□□□□□ -0.87
VPS52-217ENST00000478934 GPAT4Q86UL3 456 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 FAM219AQ8IW50 185 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 ZBTB44Q8NCP5 570 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 ZNF248Q8NDW4 579 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 PLPP5Q8NEB5 264 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 OR10S1Q8NGN2 331 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 OR2I1PQ8NGU4 316 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 OR6N1Q8NGY5 312 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 C11orf40Q8WZ69 217 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 RADILQ96JH8 1075 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 KCNK17Q96T54 332 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 WDR77Q9BQA1 342 aaPredicted RBP9.64□□□□□ -0.87
VPS52-217ENST00000478934 MRI1Q9BV20 369 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 NUP50Q9UKX7 468 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 R4GMQ9 66 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 OR2J2O76002 312 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 PTGS2P35354 604 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 OR52N4Q8NGI2 321 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 GPX8Q8TED1 209 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 ADAT3Q96EY9 351 aaPredicted RBP9.63□□□□□ -0.87
VPS52-217ENST00000478934 UTP23Q9BRU9 249 aaKnown RBP9.63□□□□□ -0.87
VPS52-217ENST00000478934 KLK13Q9UKR3 277 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 ANKUB1A6NFN9 424 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 OR2T1O43869 369 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 OR4E1P0C645 316 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 GABRA1P14867 456 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 FOSL2P15408 326 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 CRABP1P29762 137 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 GNALP38405 381 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 MYBPHQ13203 477 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 GLT8D1Q68CQ7 371 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 RGS7BPQ6MZT1 257 aaPredicted RBP9.63□□□□□ -0.87
VPS52-217ENST00000478934 GSG1LQ6UXU4 331 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 OR6M1Q8NGM8 313 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 POC1BQ8TC44 478 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 OIT3Q8WWZ8 545 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 MFFQ9GZY8 342 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 ZNF768Q9H5H4 540 aaKnown RBP9.63□□□□□ -0.87
VPS52-217ENST00000478934 CNTD2Q9H8S5 307 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 SEC61A2Q9H9S3 476 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 B3GAT1Q9P2W7 334 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 CKLFQ9UBR5 152 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 GPR160Q9UJ42 338 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 HHLA2Q9UM44 414 aa9.63□□□□□ -0.87
VPS52-217ENST00000478934 CACNA1EQ15878 2313 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 TMEM82A0PJX8 343 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 C5orf63A6NC05 138 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 MFSD2BA6NFX1 497 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 OR6C76A6NM76 312 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 FAM25EA8MYX2 175 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 SCRG1O75711 98 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 IGHMP01871 453 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 CD2P06729 351 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 H2BFMP0C1H6 154 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 SFTPDP35247 375 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 PRKXP51817 358 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 CCL7P80098 99 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 DHODHQ02127 395 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 C17orf67Q0P5P2 114 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 PMPCAQ10713 525 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 LY6G6FQ5SQ64 297 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 PRAMEF20Q5VT98 475 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 RHBDD2Q6NTF9 364 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 CFAP77Q6ZQR2 320 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 PRSS42Q7Z5A4 293 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.62□□□□□ -0.87
VPS52-217ENST00000478934 SLC6A7Q99884 636 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 WDR13Q9H1Z4 485 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 RABL2AQ9UBK7 228 aaPredicted RBP9.62□□□□□ -0.87
VPS52-217ENST00000478934 RABL2BQ9UNT1 228 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 TRAV14DV4A0A0A6YYC5 116 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 LIPT2A6NK58 231 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 MECP2P51608 486 aaKnown RBP9.62□□□□□ -0.87
VPS52-217ENST00000478934 ZNF660Q6AZW8 331 aaPredicted RBP9.62□□□□□ -0.87
VPS52-217ENST00000478934 TMEM81Q6P7N7 255 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 WDR74Q6RFH5 385 aaPredicted RBP9.62□□□□□ -0.87
VPS52-217ENST00000478934 RHOUQ7L0Q8 258 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 PAQR4Q8N4S7 273 aaPredicted RBP9.62□□□□□ -0.87
VPS52-217ENST00000478934 CHST4Q8NCG5 386 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 NUDCD2Q8WVJ2 157 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 TMEM234Q8WY98 164 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 SLAMF6Q96DU3 332 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 CHST11Q9NPF2 352 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 SERINC1Q9NRX5 453 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 SEMA5BQ9P283 1151 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 RHBDD3Q9Y3P4 386 aa9.62□□□□□ -0.87
VPS52-217ENST00000478934 CEP192Q8TEP8 1941 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 TEX51A0A1B0GUA7 166 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 TTRP02766 147 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 HOXD4P09016 255 aaPredicted RBP9.61□□□□□ -0.87
VPS52-217ENST00000478934 NUP62P37198 522 aaPredicted RBP9.61□□□□□ -0.87
VPS52-217ENST00000478934 PTGDSP41222 190 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 EMP2P54851 167 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms