RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 SPTY2D1-AS1A0A0U1RR47 76 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 A0A1B0GUS0 222 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 SPAARA0A1B0GVQ0 90 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 FAM47DPA6NHR8 397 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 BTNL10A8MVZ5 291 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 K7ERQ8 282 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 K7N7A8 449 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 TIMM8AO60220 97 aaPredicted RBP2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 DIRAS1O95057 198 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 LCA5LO95447 670 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 CLDN9O95484 217 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 HOXC4P09017 264 aaPredicted RBP2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 ZNF30P17039 623 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 PSMB1P20618 241 aaKnown RBP2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 AQP1P29972 269 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 SLC1A1P43005 524 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 DIO3P55073 304 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 RPL26P61254 145 aaKnown RBP2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 ASPHQ12797 758 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 GRB7Q14451 532 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 IRF4Q15306 451 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 CYTH1Q15438 398 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 KLHL38Q2WGJ6 581 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 CCDC122Q5T0U0 273 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 NCBP2-AS2Q69YL0 99 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 UNQ9370/PRO34162Q6UXP9 181 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 HSD17B13Q7Z5P4 300 aaPredicted RBP2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR6C4Q8NGE1 309 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR8K1Q8NGG5 319 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 SETD7Q8WTS6 366 aaKnown RBP2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 NAT6Q93015 286 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 SEC22AQ96IW7 307 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 LYSMD1Q96S90 227 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 KLF6Q99612 283 aaPredicted RBP2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 COPS8Q99627 209 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 CALN1Q9BXU9 219 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 GON7Q9BXV9 100 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 SLC17A9Q9BYT1 436 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 ISG20L2Q9H9L3 353 aaKnown RBP2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 NHEJ1Q9H9Q4 299 aaPredicted RBP2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 GPATCH2LQ9NWQ4 482 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 COPS3Q9UNS2 423 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 RPL26L1Q9UNX3 145 aaKnown RBP2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 PPIL1Q9Y3C6 166 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 KIF25-AS1Q9Y6Z4 181 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 FRYQ5TBA9 3013 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 DOCK10Q96BY6 2186 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 AHCTF1Q8WYP5 2266 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 ZFP92A6NM28 416 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR52A4PA6NMU1 304 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 DFFAO00273 331 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 SLC31A1O15431 190 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 ZNF264O43296 627 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 AQP9O43315 295 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 ERLIN1O75477 346 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 SNX4O95219 450 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 LDOC1O95751 146 aaPredicted RBP2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 GIMD1P0DJR0 217 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 NCK1P16333 377 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 CCNCP24863 283 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 CALCRP30988 508 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 TAGLN2P37802 199 aaKnown RBP2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 SSR1P43307 286 aaKnown RBP2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 RGRP47804 291 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR3A4PP47883 348 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 ATP1B3P54709 279 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 SEC61GP60059 68 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 ZNF45Q02386 682 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 PPIDQ08752 370 aaKnown RBP2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 FZD2Q14332 565 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 ELOCQ15369 112 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 PHYHD1Q5SRE7 291 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 GPRC6AQ5T6X5 926 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 HES3Q5TGS1 186 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 PDPK2PQ6A1A2 396 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 C11orf71Q6IPW1 123 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 BZW1Q7L1Q6 419 aaKnown RBP2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 DHDDSQ86SQ9 333 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 GKN2Q86XP6 184 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 C11orf42Q8N5U0 333 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 C14orf178Q8N769 122 aaPredicted RBP2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 CEP112Q8N8E3 955 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 BBS1Q8NFJ9 593 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR10H4Q8NGA5 316 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR6K2Q8NGY2 324 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 MAGEE2Q8TD90 523 aaPredicted RBP2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR1E3Q8WZA6 343 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 ST8SIA1Q92185 356 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 C10orf35Q96D05 121 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 NUS1Q96E22 293 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 PGLYRP4Q96LB8 373 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 BMFQ96LC9 184 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 CCDC42Q96M95 316 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 OLFM3Q96PB7 478 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 PPP1R2P1Q96PQ5 205 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 RNF157Q96PX1 679 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 PANX2Q96RD6 677 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 GAL3ST1Q99999 423 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 SELENOIQ9C0D9 397 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 NMUR2Q9GZQ4 415 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms