RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ADA2Q9NZK5 511 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 NDUFAF4Q9P032 175 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 COA3Q9Y2R0 106 aaPredicted RBP12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 POLR3KQ9Y2Y1 108 aaPredicted RBP12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 STARD10Q9Y365 291 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 NOP16Q9Y3C1 178 aaKnown RBP12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 IER3IP1Q9Y5U9 82 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 AUP1Q9Y679 476 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 TMEM89A2RUT3 159 aa12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 A8MXK9 166 aa12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 IMPA2O14732 288 aa12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 TXNDC12O95881 172 aa12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 AVPP01185 164 aa12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 NCK1P16333 377 aa12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 NOS3P29474 1203 aa12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 ECH1Q13011 328 aa12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 MALLQ13021 153 aa12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 TMEM255AQ5JRV8 349 aa12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 GLYATQ6IB77 296 aa12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 BTNL3Q6UXE8 466 aa12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 NLRC3Q7RTR2 1065 aa12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 LRRC28Q86X40 367 aaPredicted RBP12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 OR8G5Q8NG78 346 aa12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 ITLN1Q8WWA0 313 aa12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 PLEKHA8Q96JA3 519 aa12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 NUAK2Q9H093 628 aa12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 DCAF13Q9NV06 445 aaKnown RBP12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 IL20RAQ9UHF4 553 aa12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 MAGEL2Q9UJ55 1249 aa12.19□□□□□ -0.46
SMARCE1-209ENST00000478349 SVEP1Q4LDE5 3571 aa12.18□□□□□ -0.46
SMARCE1-209ENST00000478349 ANK2Q01484 3957 aa12.18□□□□□ -0.46
SMARCE1-209ENST00000478349 RER1O15258 196 aa12.18□□□□□ -0.46
SMARCE1-209ENST00000478349 PTP4A3O75365 173 aa12.18□□□□□ -0.46
SMARCE1-209ENST00000478349 GADD45GO95257 159 aa12.18□□□□□ -0.46
SMARCE1-209ENST00000478349 IRF2P14316 349 aa12.18□□□□□ -0.46
SMARCE1-209ENST00000478349 OMPP47874 163 aa12.18□□□□□ -0.46
SMARCE1-209ENST00000478349 MMP16P51512 607 aa12.18□□□□□ -0.46
SMARCE1-209ENST00000478349 ZNF154Q13106 437 aa12.18□□□□□ -0.46
SMARCE1-209ENST00000478349 OR2AJ1Q8NGZ0 328 aa12.18□□□□□ -0.46
SMARCE1-209ENST00000478349 ERMAPQ96PL5 475 aaPredicted RBP12.18□□□□□ -0.46
SMARCE1-209ENST00000478349 CDADC1Q9BWV3 514 aa12.18□□□□□ -0.46
SMARCE1-209ENST00000478349 PTTG3PQ9NZH4 202 aa12.18□□□□□ -0.46
SMARCE1-209ENST00000478349 EGFL7Q9UHF1 273 aa12.18□□□□□ -0.46
SMARCE1-209ENST00000478349 NUP50Q9UKX7 468 aa12.18□□□□□ -0.46
SMARCE1-209ENST00000478349 TMCC3Q9ULS5 477 aa12.18□□□□□ -0.46
SMARCE1-209ENST00000478349 TMEM178BH3BS89 294 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 ARPC3O15145 178 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 IDH3BO43837 385 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 FSHBP01225 129 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 SCG5P05408 212 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 RPS2P15880 293 aaKnown RBP12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 ZNF12P17014 697 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 ZNF26P17031 533 aaPredicted RBP12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 FUT4P22083 530 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 FPR3P25089 353 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 SLC6A9P48067 706 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 SPIBQ01892 262 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 COX10Q12887 443 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 FOXL1Q12952 345 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 ZMYND11Q15326 602 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 CCDC92Q53HC0 331 aaPredicted RBP12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 RPL13AP3Q6NVV1 102 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 LEG1Q6P5S2 330 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 Q6ZR03 302 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 OR5AS1Q8N127 324 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 OR52L1Q8NGH7 329 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 OR52J3Q8NH60 311 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 DHRS1Q96LJ7 313 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 IFT27Q9BW83 186 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 SSBP3Q9BWW4 388 aaPredicted RBP12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 GORASP2Q9H8Y8 452 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 GCM1Q9NP62 436 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 NDE1Q9NXR1 346 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 GMPR2Q9P2T1 348 aaKnown RBP12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 MIOXQ9UGB7 285 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 OPN4Q9UHM6 478 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 KCNG2Q9UJ96 466 aa12.17□□□□□ -0.46
SMARCE1-209ENST00000478349 TRBV4-1A0A0J9YWV2 114 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 IQCF6A8MYZ5 107 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 OR10H3O60404 316 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 FSTL3O95633 263 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 PPP1R3DO95685 299 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 HLA-DQA2P01906 255 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 PPIAL4GP0DN37 164 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 ZFP36P26651 326 aaKnown RBP12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 MTNR1AP48039 350 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 RAD23AP54725 363 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 UBA52P62987 128 aaKnown RBP12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 ZNF181Q2M3W8 571 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 RFX4Q33E94 735 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 SAMD4BQ5PRF9 694 aaKnown RBP12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 OR2T2Q6IF00 324 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 LRRN1Q6UXK5 716 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 DEFB108BQ8NET1 73 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 OR10AD1Q8NGE0 317 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 OR8B3Q8NGG8 313 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 OR4C15Q8NGM1 316 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 OR11L1Q8NGX0 322 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 SLC7A6Q92536 515 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms