RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 C19orf18Q8NEA5 215 aa13.62□□□□□ -0.23
APOBEC3F-203ENST00000476513 FNDC8Q8TC99 324 aa13.62□□□□□ -0.23
APOBEC3F-203ENST00000476513 SLC7A6Q92536 515 aa13.62□□□□□ -0.23
APOBEC3F-203ENST00000476513 WDFY2Q96P53 400 aa13.62□□□□□ -0.23
APOBEC3F-203ENST00000476513 WACQ9BTA9 647 aa13.62□□□□□ -0.23
APOBEC3F-203ENST00000476513 LIPFP07098 398 aa13.61□□□□□ -0.23
APOBEC3F-203ENST00000476513 EGR3Q06889 387 aa13.61□□□□□ -0.23
APOBEC3F-203ENST00000476513 SCRN3Q0VDG4 424 aa13.61□□□□□ -0.23
APOBEC3F-203ENST00000476513 CYP51A1Q16850 503 aa13.61□□□□□ -0.23
APOBEC3F-203ENST00000476513 DLEU7Q6UYE1 221 aa13.61□□□□□ -0.23
APOBEC3F-203ENST00000476513 FBXW12Q6X9E4 464 aa13.61□□□□□ -0.23
APOBEC3F-203ENST00000476513 MRAPQ8TCY5 172 aa13.61□□□□□ -0.23
APOBEC3F-203ENST00000476513 TMEM239Q8WW34 195 aa13.61□□□□□ -0.23
APOBEC3F-203ENST00000476513 LHX4Q969G2 390 aa13.61□□□□□ -0.23
APOBEC3F-203ENST00000476513 TAMM41Q96BW9 452 aa13.61□□□□□ -0.23
APOBEC3F-203ENST00000476513 ZBTB9Q96C00 473 aa13.61□□□□□ -0.23
APOBEC3F-203ENST00000476513 TECTBQ96PL2 329 aa13.61□□□□□ -0.23
APOBEC3F-203ENST00000476513 CENPHQ9H3R5 247 aa13.61□□□□□ -0.23
APOBEC3F-203ENST00000476513 PTTG3PQ9NZH4 202 aa13.61□□□□□ -0.23
APOBEC3F-203ENST00000476513 CCDC167Q9P0B6 97 aa13.61□□□□□ -0.23
APOBEC3F-203ENST00000476513 RYR3Q15413 4870 aa13.61□□□□□ -0.23
APOBEC3F-203ENST00000476513 ZNF816-ZNF321PA0A0X1KG74 233 aa13.6□□□□□ -0.23
APOBEC3F-203ENST00000476513 TSPAN9O75954 239 aa13.6□□□□□ -0.23
APOBEC3F-203ENST00000476513 CD276Q5ZPR3 534 aa13.6□□□□□ -0.23
APOBEC3F-203ENST00000476513 EPGNQ6UW88 154 aa13.6□□□□□ -0.23
APOBEC3F-203ENST00000476513 PATL1Q86TB9 770 aaKnown RBP13.6□□□□□ -0.23
APOBEC3F-203ENST00000476513 IGFN1Q86VF2 1251 aa13.6□□□□□ -0.23
APOBEC3F-203ENST00000476513 PCYOX1LQ8NBM8 494 aa13.6□□□□□ -0.23
APOBEC3F-203ENST00000476513 SCCPDHQ8NBX0 429 aa13.6□□□□□ -0.23
APOBEC3F-203ENST00000476513 ZNF582Q96NG8 517 aaPredicted RBP13.6□□□□□ -0.23
APOBEC3F-203ENST00000476513 SIRPDQ9H106 197 aa13.6□□□□□ -0.23
APOBEC3F-203ENST00000476513 DPAGT1Q9H3H5 408 aa13.6□□□□□ -0.23
APOBEC3F-203ENST00000476513 CTSZQ9UBR2 303 aa13.6□□□□□ -0.23
APOBEC3F-203ENST00000476513 TMCC3Q9ULS5 477 aa13.6□□□□□ -0.23
APOBEC3F-203ENST00000476513 HIF3AQ9Y2N7 669 aa13.6□□□□□ -0.23
APOBEC3F-203ENST00000476513 J3QW42 95 aa13.59□□□□□ -0.23
APOBEC3F-203ENST00000476513 IRF2P14316 349 aa13.59□□□□□ -0.23
APOBEC3F-203ENST00000476513 NPY4RP50391 375 aa13.59□□□□□ -0.23
APOBEC3F-203ENST00000476513 LOXL3P58215 753 aa13.59□□□□□ -0.23
APOBEC3F-203ENST00000476513 CTXN1P60606 82 aa13.59□□□□□ -0.23
APOBEC3F-203ENST00000476513 SELPLGQ14242 412 aa13.59□□□□□ -0.23
APOBEC3F-203ENST00000476513 METTL11BQ5VVY1 283 aa13.59□□□□□ -0.23
APOBEC3F-203ENST00000476513 DHRS7BQ6IAN0 325 aaPredicted RBP13.59□□□□□ -0.23
APOBEC3F-203ENST00000476513 LRRC75AQ8NAA5 344 aa13.59□□□□□ -0.23
APOBEC3F-203ENST00000476513 BHLHE23Q8NDY6 225 aa13.59□□□□□ -0.23
APOBEC3F-203ENST00000476513 LRTOMTQ8WZ04 291 aa13.59□□□□□ -0.23
APOBEC3F-203ENST00000476513 USH1CQ9Y6N9 552 aa13.59□□□□□ -0.23
APOBEC3F-203ENST00000476513 NOTCH3Q9UM47 2321 aa13.58□□□□□ -0.23
APOBEC3F-203ENST00000476513 A0A1B0GWJ7 208 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 TMEM120BA0PK00 339 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 OR6C6A6NF89 314 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 A6NIZ1 184 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 IQCF6A8MYZ5 107 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 H7C1C5 153 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 FBP2O00757 339 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 HLA-DPB1P04440 258 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 DBHP09172 617 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 GATA4P43694 442 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 CRYBA2P53672 197 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 MTPNP58546 118 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 TAS2R41P59536 307 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 RAP1BP61224 184 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 LCN6P62502 163 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 RAP1AP62834 184 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 HOXA4Q00056 320 aaPredicted RBP13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 CLEC12AQ5QGZ9 265 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 PDZD9Q8IXQ8 264 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 PIP4P2Q8N4L2 257 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 MREGQ8N565 214 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 PNLDC1Q8NA58 520 aaKnown RBP13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 Q8TCH9 128 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 SLC26A7Q8TE54 656 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 RASD2Q96D21 266 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 MMADHCQ9H3L0 296 aaPredicted RBP13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 ERVK-18Q9QC07 812 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 RIMS3Q9UJD0 308 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 MED31Q9Y3C7 131 aa13.58□□□□□ -0.24
APOBEC3F-203ENST00000476513 SHOX2O60902 331 aaPredicted RBP13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 FAM20BO75063 409 aa13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 OR5F1O95221 314 aa13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 TNFRSF1BP20333 461 aa13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 FUT4P22083 530 aa13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 FPR3P25089 353 aa13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 RGS6P49758 472 aa13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 COX10Q12887 443 aa13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 MAB21L1Q13394 359 aa13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 PIN1Q13526 163 aaPredicted RBP13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 AGKQ53H12 422 aa13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 OTPQ5XKR4 325 aa13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 OR5L1Q8NGL2 311 aa13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 OR11L1Q8NGX0 322 aa13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 OR1F12Q8NHA8 337 aa13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 LRRC8CQ8TDW0 803 aa13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 SMURF1Q9HCE7 757 aa13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 TMEM100Q9NV29 134 aa13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 SH3GLB1Q9Y371 365 aa13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 TET2Q6N021 2002 aaPredicted RBP13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 PLXNB1O43157 2135 aa13.57□□□□□ -0.24
APOBEC3F-203ENST00000476513 POLR3GO15318 223 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms