RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 SPTSSAQ969W0 71 aa12.39□□□□□ -0.43
ABCF3-211ENST00000475728 MARS2Q96GW9 593 aaKnown RBP12.39□□□□□ -0.43
ABCF3-211ENST00000475728 ATF6BQ99941 703 aa12.39□□□□□ -0.43
ABCF3-211ENST00000475728 REG4Q9BYZ8 158 aa12.39□□□□□ -0.43
ABCF3-211ENST00000475728 OR2J1Q9GZK6 312 aa12.39□□□□□ -0.43
ABCF3-211ENST00000475728 HINT3Q9NQE9 182 aaKnown RBP12.39□□□□□ -0.43
ABCF3-211ENST00000475728 CYSLTR2Q9NS75 346 aa12.39□□□□□ -0.43
ABCF3-211ENST00000475728 MRPL22Q9NWU5 206 aaKnown RBP12.39□□□□□ -0.43
ABCF3-211ENST00000475728 COMMD3-BMI1R4GMX3 469 aa12.39□□□□□ -0.43
ABCF3-211ENST00000475728 ACANP16112 2415 aa12.39□□□□□ -0.43
ABCF3-211ENST00000475728 LOC390937A0A1W2PQ73 354 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 PLSCR5A0PG75 271 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 TVP23AA6NH52 213 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 FAM183AA6NL82 134 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 PRODHO43272 600 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 GLCEO94923 617 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 GYPBP06028 91 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 IGFBP5P24593 272 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 GSTT1P30711 240 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 ALDH3B1P43353 468 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 ERVS71-1P61550 626 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 SNAPC1Q16533 368 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 PCK2Q16822 640 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 KDM4DQ6B0I6 523 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 CFAP77Q6ZQR2 320 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 SHFQ7M4L6 423 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 ZNF525Q8N782 197 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 SLC25A40Q8TBP6 338 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 APOBEC3DQ96AK3 386 aaPredicted RBP12.38□□□□□ -0.43
ABCF3-211ENST00000475728 INTS14Q96SY0 518 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 RBM4BQ9BQ04 359 aaKnown RBP12.38□□□□□ -0.43
ABCF3-211ENST00000475728 NKIRAS2Q9NYR9 191 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 OAZ3Q9UMX2 235 aa12.38□□□□□ -0.43
ABCF3-211ENST00000475728 ZNF593O00488 134 aaPredicted RBP12.37□□□□□ -0.43
ABCF3-211ENST00000475728 CLPTM1O96005 669 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 NGFP01138 241 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 SPARCP09486 303 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 DAOP14920 347 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 TPTEP56180 551 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 MAD2L1BPQ15013 274 aaPredicted RBP12.37□□□□□ -0.43
ABCF3-211ENST00000475728 PTGES3Q15185 160 aaKnown RBP12.37□□□□□ -0.43
ABCF3-211ENST00000475728 TAF13Q15543 124 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 CARTPTQ16568 116 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 FAM209AQ5JX71 171 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 SLC35D3Q5M8T2 416 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 SPATA46Q5T0L3 261 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 LINC01590Q5TEZ4 76 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 PLBD1Q6P4A8 553 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 ZNF511Q8NB15 262 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 C10orf105Q8TEF2 133 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 UBASH3BQ8TF42 649 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 SLC7A6Q92536 515 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 PTP4A1Q93096 173 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 PIMREGQ9BSJ6 248 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 OR51V1Q9H2C8 321 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 SEMA6AQ9H2E6 1030 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 TPK1Q9H3S4 243 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 TVP23BQ9NYZ1 205 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 MYEF2Q9P2K5 600 aaKnown RBP12.37□□□□□ -0.43
ABCF3-211ENST00000475728 ORC6Q9Y5N6 252 aa12.37□□□□□ -0.43
ABCF3-211ENST00000475728 ARFGEF3Q5TH69 2177 aa12.36□□□□□ -0.43
ABCF3-211ENST00000475728 C17orf100A8MU93 164 aa12.36□□□□□ -0.43
ABCF3-211ENST00000475728 RNF223E7ERA6 249 aa12.36□□□□□ -0.43
ABCF3-211ENST00000475728 SMAD7O15105 426 aaKnown RBP12.36□□□□□ -0.43
ABCF3-211ENST00000475728 TIMM8AO60220 97 aaPredicted RBP12.36□□□□□ -0.43
ABCF3-211ENST00000475728 CLUP10909 449 aa12.36□□□□□ -0.43
ABCF3-211ENST00000475728 RAC2P15153 192 aa12.36□□□□□ -0.43
ABCF3-211ENST00000475728 SLC15A1P46059 708 aa12.36□□□□□ -0.43
ABCF3-211ENST00000475728 MRPS11P82912 194 aaKnown RBP12.36□□□□□ -0.43
ABCF3-211ENST00000475728 KRTAP27-1Q3LI81 207 aa12.36□□□□□ -0.43
ABCF3-211ENST00000475728 KLHL12Q53G59 568 aa12.36□□□□□ -0.43
ABCF3-211ENST00000475728 TMEM236Q5W0B7 351 aa12.36□□□□□ -0.43
ABCF3-211ENST00000475728 CXXC5Q7LFL8 322 aaKnown RBP12.36□□□□□ -0.43
ABCF3-211ENST00000475728 DCXRQ7Z4W1 244 aa12.36□□□□□ -0.43
ABCF3-211ENST00000475728 ERI1Q8IV48 349 aaKnown RBP12.36□□□□□ -0.43
ABCF3-211ENST00000475728 CPOQ8IVL8 374 aa12.36□□□□□ -0.43
ABCF3-211ENST00000475728 ZCCHC24Q8N2G6 241 aaKnown RBP12.36□□□□□ -0.43
ABCF3-211ENST00000475728 ZNF786Q8N393 782 aa12.36□□□□□ -0.43
ABCF3-211ENST00000475728 ZNRF4Q8WWF5 429 aa12.36□□□□□ -0.43
ABCF3-211ENST00000475728 MAP6Q96JE9 813 aa12.36□□□□□ -0.43
ABCF3-211ENST00000475728 DIRC2Q96SL1 478 aa12.36□□□□□ -0.43
ABCF3-211ENST00000475728 MED20Q9H944 212 aa12.36□□□□□ -0.43
ABCF3-211ENST00000475728 WDR76Q9H967 626 aa12.36□□□□□ -0.43
ABCF3-211ENST00000475728 MARCH7Q9H992 704 aa12.36□□□□□ -0.43
ABCF3-211ENST00000475728 DDX28Q9NUL7 540 aaKnown RBP12.36□□□□□ -0.43
ABCF3-211ENST00000475728 STARD10Q9Y365 291 aa12.36□□□□□ -0.43
ABCF3-211ENST00000475728 IGHV4-30-2A0A087WSY4 118 aa12.35□□□□□ -0.43
ABCF3-211ENST00000475728 SAC3D1A6NKF1 404 aa12.35□□□□□ -0.43
ABCF3-211ENST00000475728 ZAR1LA6NP61 321 aa12.35□□□□□ -0.43
ABCF3-211ENST00000475728 ZNF878C9JN71 531 aa12.35□□□□□ -0.43
ABCF3-211ENST00000475728 F5H5K5 113 aa12.35□□□□□ -0.43
ABCF3-211ENST00000475728 H3BNX3 289 aa12.35□□□□□ -0.43
ABCF3-211ENST00000475728 LY6HO94772 140 aa12.35□□□□□ -0.43
ABCF3-211ENST00000475728 APOC1P02654 83 aa12.35□□□□□ -0.43
ABCF3-211ENST00000475728 DBHP09172 617 aa12.35□□□□□ -0.43
ABCF3-211ENST00000475728 ACSM4P0C7M7 580 aa12.35□□□□□ -0.43
ABCF3-211ENST00000475728 NAT2P11245 290 aa12.35□□□□□ -0.43
ABCF3-211ENST00000475728 KITLGP21583 273 aa12.35□□□□□ -0.43
ABCF3-211ENST00000475728 MPV17P39210 176 aa12.35□□□□□ -0.43
ABCF3-211ENST00000475728 ZNF81P51508 661 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms