RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 RELL2Q8NC24 303 aaPredicted RBP10.54□□□□□ -0.72
U2AF1-209ENST00000475639 CCDC74AQ96AQ1 378 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 CBLCQ9ULV8 474 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 PTRH2Q9Y3E5 179 aaKnown RBP10.54□□□□□ -0.72
U2AF1-209ENST00000475639 GLTPD2A6NH11 291 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 SOCS7O14512 581 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 HSBP1O75506 76 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 SEMA4FO95754 770 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 Q3ZCU0 254 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 TRIM61Q5EBN2 209 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 AAED1Q7RTV5 226 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 LDLRAD3Q86YD5 345 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 LCORQ96JN0 433 aaPredicted RBP10.54□□□□□ -0.72
U2AF1-209ENST00000475639 P2RY12Q9H244 342 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 DUSP22Q9NRW4 184 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 TRPM7Q96QT4 1865 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 ZNF207O43670 478 aaKnown RBP10.54□□□□□ -0.72
U2AF1-209ENST00000475639 GREM1O60565 184 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 SEMA7AO75326 666 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 NXPH2O95156 264 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 MBP02144 154 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 OR8G3PP0DMU2 310 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 DTYMKP23919 212 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 MPGP29372 298 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 TAS2R45P59539 299 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 PPP2CAP67775 309 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 TNFRSF17Q02223 184 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 KIR2DS3Q14952 304 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 RPS26P11Q5JNZ5 115 aaPredicted RBP10.54□□□□□ -0.72
U2AF1-209ENST00000475639 KHDC1LQ5JSQ8 128 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 PLAC9Q5JTB6 97 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 FRMD1Q8N878 549 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 OR11G2Q8NGC1 345 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 FGF11Q92914 225 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 TMPRSS13Q9BYE2 586 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 KCND3Q9UK17 655 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 AKAP6Q13023 2319 aa10.54□□□□□ -0.72
U2AF1-209ENST00000475639 FAM186AA6NE01 2351 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 TTC3P53804 2025 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 OR6C76A6NM76 312 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 PRAMEF4O60810 478 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 FBP1P09467 338 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 MEOX1P50221 254 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 EDDM3BP56851 147 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 DCAF7P61962 342 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 SUMO1P63165 101 aaKnown RBP10.53□□□□□ -0.72
U2AF1-209ENST00000475639 H3F3AP84243 136 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 TMEM255AQ5JRV8 349 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 ZNF626Q68DY1 528 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 PUSL1Q8N0Z8 303 aaKnown RBP10.53□□□□□ -0.72
U2AF1-209ENST00000475639 OR2G3Q8NGZ4 309 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 CHRDL1Q9BU40 450 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 BARX1Q9HBU1 254 aaPredicted RBP10.53□□□□□ -0.72
U2AF1-209ENST00000475639 MRPS28Q9Y2Q9 187 aaKnown RBP10.53□□□□□ -0.72
U2AF1-209ENST00000475639 TIMM8AO60220 97 aaPredicted RBP10.53□□□□□ -0.72
U2AF1-209ENST00000475639 IGF2P01344 180 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 HNRNPA2B1P22626 353 aaKnown RBP10.53□□□□□ -0.72
U2AF1-209ENST00000475639 HBMQ6B0K9 141 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 OR8G2PQ6IF36 304 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 VHLLQ6RSH7 139 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 SLC35D2Q76EJ3 337 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 ACOT4Q8N9L9 421 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 LKAAEAR1Q8TD35 194 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 PHYHIPQ92561 330 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 IGSF21Q96ID5 467 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 TRIB1Q96RU8 372 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 ADAT1Q9BUB4 502 aaKnown RBP10.53□□□□□ -0.72
U2AF1-209ENST00000475639 FAM96BQ9Y3D0 163 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 A0A0A6YYC8 382 aaPredicted RBP10.53□□□□□ -0.72
U2AF1-209ENST00000475639 ZNF727A8MUV8 499 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 I3L1I5 382 aaPredicted RBP10.53□□□□□ -0.72
U2AF1-209ENST00000475639 IGHV2-70P01814 119 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 CD46P15529 392 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 RNF212Q495C1 297 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 UBE2NLQ5JXB2 153 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 NPSR1Q6W5P4 371 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 NDUFAF7Q7L592 441 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 CATSPERDQ86XM0 798 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 CISD2Q8N5K1 135 aaKnown RBP10.53□□□□□ -0.72
U2AF1-209ENST00000475639 FGF20Q9NP95 211 aaPredicted RBP10.53□□□□□ -0.72
U2AF1-209ENST00000475639 B3GAT1Q9P2W7 334 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 MIOXQ9UGB7 285 aa10.53□□□□□ -0.72
U2AF1-209ENST00000475639 KCNE1BA0A087WTH5 132 aa10.52□□□□□ -0.72
U2AF1-209ENST00000475639 KIR2DS1A0A191URI9 304 aa10.52□□□□□ -0.72
U2AF1-209ENST00000475639 ACOD1A6NK06 481 aa10.52□□□□□ -0.72
U2AF1-209ENST00000475639 EFSO43281 561 aa10.52□□□□□ -0.72
U2AF1-209ENST00000475639 TUSC2O75896 110 aa10.52□□□□□ -0.72
U2AF1-209ENST00000475639 GJB5O95377 273 aa10.52□□□□□ -0.72
U2AF1-209ENST00000475639 PMS2P2O95744 297 aa10.52□□□□□ -0.72
U2AF1-209ENST00000475639 OR8U8P0C7N1 319 aa10.52□□□□□ -0.72
U2AF1-209ENST00000475639 G0S2P27469 103 aa10.52□□□□□ -0.72
U2AF1-209ENST00000475639 KIR2DS4P43632 304 aa10.52□□□□□ -0.72
U2AF1-209ENST00000475639 AMTP48728 403 aa10.52□□□□□ -0.72
U2AF1-209ENST00000475639 FABP9Q0Z7S8 132 aa10.52□□□□□ -0.72
U2AF1-209ENST00000475639 RAB33AQ14088 237 aa10.52□□□□□ -0.72
U2AF1-209ENST00000475639 KIR2DS1Q14954 304 aa10.52□□□□□ -0.72
U2AF1-209ENST00000475639 ZNF468Q5VIY5 522 aaPredicted RBP10.52□□□□□ -0.72
U2AF1-209ENST00000475639 NHLRC1Q6VVB1 395 aa10.52□□□□□ -0.72
U2AF1-209ENST00000475639 UBTD2Q8WUN7 234 aa10.52□□□□□ -0.72
U2AF1-209ENST00000475639 SLC22A12Q96S37 553 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms