RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 STOMP27105 288 aa13.16□□□□□ -0.3
MCF2L-224ENST00000475524 PCSK6P29122 969 aa13.16□□□□□ -0.3
MCF2L-224ENST00000475524 HTR5AP47898 357 aa13.16□□□□□ -0.3
MCF2L-224ENST00000475524 RGS6P49758 472 aa13.16□□□□□ -0.3
MCF2L-224ENST00000475524 GDI2P50395 445 aaKnown RBP13.16□□□□□ -0.3
MCF2L-224ENST00000475524 IDH3GP51553 393 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-224ENST00000475524 DAZAP2Q15038 168 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-224ENST00000475524 OTPQ5XKR4 325 aa13.16□□□□□ -0.3
MCF2L-224ENST00000475524 DRAM2Q6UX65 266 aa13.16□□□□□ -0.3
MCF2L-224ENST00000475524 UNQ6126/PRO20091Q6UXV3 157 aa13.16□□□□□ -0.3
MCF2L-224ENST00000475524 TMPRSS11AQ6ZMR5 421 aa13.16□□□□□ -0.3
MCF2L-224ENST00000475524 C22orf34Q6ZV56 151 aa13.16□□□□□ -0.3
MCF2L-224ENST00000475524 KRT77Q7Z794 578 aa13.16□□□□□ -0.3
MCF2L-224ENST00000475524 SLC30A7Q8NEW0 376 aa13.16□□□□□ -0.3
MCF2L-224ENST00000475524 SNX33Q8WV41 574 aa13.16□□□□□ -0.3
MCF2L-224ENST00000475524 RADILQ96JH8 1075 aa13.16□□□□□ -0.3
MCF2L-224ENST00000475524 AMELYQ99218 206 aa13.16□□□□□ -0.3
MCF2L-224ENST00000475524 RHNO1Q9BSD3 238 aa13.16□□□□□ -0.3
MCF2L-224ENST00000475524 ALG8Q9BVK2 526 aa13.16□□□□□ -0.3
MCF2L-224ENST00000475524 ESRP2Q9H6T0 727 aaKnown RBP13.16□□□□□ -0.3
MCF2L-224ENST00000475524 SP140LQ9H930 580 aa13.16□□□□□ -0.3
MCF2L-224ENST00000475524 PAK1IP1Q9NWT1 392 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-224ENST00000475524 NPAP1Q9NZP6 1156 aa13.16□□□□□ -0.3
MCF2L-224ENST00000475524 KCNN3Q9UGI6 736 aa13.16□□□□□ -0.3
MCF2L-224ENST00000475524 METTL15A6NJ78 407 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 C19orf84I3L1E1 186 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 ABHD16AO95870 558 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 TUBG1P23258 451 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 CD40P25942 277 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 RIDAP52758 137 aaKnown RBP13.15□□□□□ -0.3
MCF2L-224ENST00000475524 HCCSP53701 268 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 TPTEP56180 551 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 PSMA6P60900 246 aaKnown RBP13.15□□□□□ -0.3
MCF2L-224ENST00000475524 NAAAQ02083 359 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 IRF3Q14653 427 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 TAF13Q15543 124 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 NCMAPQ5T1S8 102 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 ARL9Q6T311 187 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 SSX6Q7RTT6 188 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 FAM220AQ7Z4H9 259 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 WFDC8Q8IUA0 241 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.15□□□□□ -0.3
MCF2L-224ENST00000475524 KLHL36Q8N4N3 616 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 LINC01560Q8TB33 94 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 ITFG2Q969R8 447 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 TBX5Q99593 518 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 ZNF696Q9H7X3 374 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 MOB1AQ9H8S9 216 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 TUBG2Q9NRH3 451 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 CENPMQ9NSP4 180 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 ERGIC3Q9Y282 383 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 LRP12Q9Y561 859 aa13.15□□□□□ -0.3
MCF2L-224ENST00000475524 LOC100509620A0A075B734 347 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 M0R135 149 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 CRYAAP02489 173 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 ZNF35P13682 527 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 EEF1B2P24534 225 aaKnown RBP13.14□□□□□ -0.31
MCF2L-224ENST00000475524 APEX1P27695 318 aaKnown RBP13.14□□□□□ -0.31
MCF2L-224ENST00000475524 HSD11B1P28845 292 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 MMP16P51512 607 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 ZNF83P51522 516 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 TBCEQ15813 527 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-224ENST00000475524 ZNF829Q3KNS6 432 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-224ENST00000475524 FDX2Q6P4F2 183 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 TMEM154Q6P9G4 183 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 LRRN1Q6UXK5 716 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 MEX3BQ6ZN04 569 aaKnown RBP13.14□□□□□ -0.31
MCF2L-224ENST00000475524 COLCA1Q6ZS62 124 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 SVOPQ8N4V2 548 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 RFLNBQ8N5W9 214 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 SMAP2Q8WU79 429 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-224ENST00000475524 ZNF799Q96GE5 643 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 COG8Q96MW5 612 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 KCNS3Q9BQ31 491 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 MND1Q9BWT6 205 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 ELOVL3Q9HB03 270 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 CDH20Q9HBT6 801 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 TBCCD1Q9NVR7 557 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 SLCO1C1Q9NYB5 712 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 CRIM1Q9NZV1 1036 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 MRM2Q9UI43 246 aaKnown RBP13.14□□□□□ -0.31
MCF2L-224ENST00000475524 IKZF2Q9UKS7 526 aa13.14□□□□□ -0.31
MCF2L-224ENST00000475524 ANKHD1Q8IWZ3 2542 aaKnown RBP13.14□□□□□ -0.31
MCF2L-224ENST00000475524 IGHV2OR16-5A0A0B4J2B6 119 aa13.13□□□□□ -0.31
MCF2L-224ENST00000475524 PRR32B1ATL7 298 aa13.13□□□□□ -0.31
MCF2L-224ENST00000475524 M0R1B8 84 aa13.13□□□□□ -0.31
MCF2L-224ENST00000475524 MYL12BO14950 172 aa13.13□□□□□ -0.31
MCF2L-224ENST00000475524 CLDN1O95832 211 aa13.13□□□□□ -0.31
MCF2L-224ENST00000475524 MT-ND5P03915 603 aa13.13□□□□□ -0.31
MCF2L-224ENST00000475524 CELA3BP08861 270 aa13.13□□□□□ -0.31
MCF2L-224ENST00000475524 RPSAP08865 295 aaKnown RBP13.13□□□□□ -0.31
MCF2L-224ENST00000475524 ACSM4P0C7M7 580 aa13.13□□□□□ -0.31
MCF2L-224ENST00000475524 C21orf33P30042 268 aaPredicted RBP13.13□□□□□ -0.31
MCF2L-224ENST00000475524 ETV1P50549 477 aa13.13□□□□□ -0.31
MCF2L-224ENST00000475524 MVKQ03426 396 aa13.13□□□□□ -0.31
MCF2L-224ENST00000475524 RSPO1Q2MKA7 263 aaPredicted RBP13.13□□□□□ -0.31
MCF2L-224ENST00000475524 ZNF544Q6NX49 715 aa13.13□□□□□ -0.31
MCF2L-224ENST00000475524 ZNF773Q6PK81 442 aa13.13□□□□□ -0.31
MCF2L-224ENST00000475524 LHFPL3Q86UP9 236 aa13.13□□□□□ -0.31
MCF2L-224ENST00000475524 NANOGP1Q8N7R0 232 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms