RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 SERPINE1P05121 402 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 CHRNB4P30926 498 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 SLC16A1P53985 500 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 SRSF2Q01130 221 aaKnown RBP4.35□□□□□ -1.71
NPHP3-206ENST00000474871 TAF13Q15543 124 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 TAF9Q16594 264 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 TMEM241Q24JQ0 296 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF750Q32MQ0 723 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 AMZ1Q400G9 498 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF567Q8N184 647 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 OR4K5Q8NGD3 323 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 OR2T11Q8NH01 316 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 WDR92Q96MX6 357 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 C20orf144Q9BQM9 153 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 ALG12Q9BV10 488 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 DPY30Q9C005 99 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 MEGF9Q9H1U4 602 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 SLC7A10Q9NS82 523 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 ARL15Q9NXU5 204 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 PIPOXQ9P0Z9 390 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 DAPP1Q9UN19 280 aa4.35□□□□□ -1.71
NPHP3-206ENST00000474871 TRAV30A0A087WSZ9 112 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 IQCMA0A1B0GVH7 501 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF878C9JN71 531 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 CLDN34H7C241 214 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 NBR2O15453 112 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 RS1O15537 224 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 PLRG1O43660 514 aaKnown RBP4.34□□□□□ -1.71
NPHP3-206ENST00000474871 ALOX12BO75342 701 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 TNFSF15O95150 251 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 SLC25A14O95258 325 aaPredicted RBP4.34□□□□□ -1.71
NPHP3-206ENST00000474871 HOXB6P17509 224 aaKnown RBP4.34□□□□□ -1.71
NPHP3-206ENST00000474871 C4BPBP20851 252 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 CCKARP32238 428 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 CDKN2BP42772 138 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 SMIM11AP58511 58 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 CHRNB3Q05901 458 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 PLCXD2Q0VAA5 305 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 SRSF6Q13247 344 aaKnown RBP4.34□□□□□ -1.71
NPHP3-206ENST00000474871 SIX1Q15475 284 aaPredicted RBP4.34□□□□□ -1.71
NPHP3-206ENST00000474871 SPANXN3Q5MJ09 141 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 AADACL2Q6P093 401 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF529Q6P280 563 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 FBXW12Q6X9E4 464 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 NEGR1Q7Z3B1 354 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 OR14L1PQ8NHC6 308 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 SULT4A1Q9BR01 284 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 TPSD1Q9BZJ3 242 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 LAT2Q9GZY6 243 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 CDC42EP4Q9H3Q1 356 aaKnown RBP4.34□□□□□ -1.71
NPHP3-206ENST00000474871 CD320Q9NPF0 282 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 MYOTQ9UBF9 498 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 PCNTO95613 3336 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 GLYATL1P3A0A0U1RQE8 302 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 NPEPPSL1A6NEC2 478 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 GAPDHP04406 335 aaKnown RBP4.34□□□□□ -1.71
NPHP3-206ENST00000474871 NHLRC4P0CG21 123 aaPredicted RBP4.34□□□□□ -1.71
NPHP3-206ENST00000474871 FPR2P25090 351 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 MIPP30301 263 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 LSSP48449 732 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 UCNP55089 124 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 CDH11P55287 796 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 DEFA5Q01523 94 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 MELKQ14680 651 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 FCN2Q15485 313 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 TMEM41BQ5BJD5 291 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 GPRC6AQ5T6X5 926 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 KIAA0895LQ68EN5 471 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 ALKAL2Q6UX46 152 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 UBE3DQ7Z6J8 389 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 C17orf64Q86WR6 236 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 GPSM1Q86YR5 675 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 CMTM8Q8IZV2 173 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 SMIM20Q8N5G0 67 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 KLHDC7BQ96G42 594 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 CXCL16Q9H2A7 254 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 IL23AQ9NPF7 189 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 ASF1AQ9Y294 204 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 UFC1Q9Y3C8 167 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 COX11Q9Y6N1 276 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 CCDC195A0A1B0GUA6 201 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 TCRBV5S1A1TA0A578 114 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 YJEFN3A6XGL0 299 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 GFRA2O00451 464 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 GALR3O60755 368 aaPredicted RBP4.34□□□□□ -1.71
NPHP3-206ENST00000474871 MPZL1O95297 269 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 RAB40ALP0C0E4 278 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 GPR6P46095 362 aaPredicted RBP4.34□□□□□ -1.71
NPHP3-206ENST00000474871 TBPL1P62380 186 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 PDE7AQ13946 482 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF77Q15935 545 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 ODF4Q2M2E3 257 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 KIAA1644Q3SXP7 199 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 ATP6AP1LQ52LC2 224 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 GCSAMLQ5JQS6 135 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 MBNL2Q5VZF2 373 aaKnown RBP4.34□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF613Q6PF04 617 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 CEACAM20Q6UY09 585 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 MBOAT2Q6ZWT7 520 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 SLC36A1Q7Z2H8 476 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms