RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 RNF133Q8WVZ7 376 aa14.55□□□□□ -0.08
SCAF11-206ENST00000474828 ATF6BQ99941 703 aa14.55□□□□□ -0.08
SCAF11-206ENST00000474828 C1QTNF5Q9BXJ0 243 aa14.55□□□□□ -0.08
SCAF11-206ENST00000474828 ELOVL3Q9HB03 270 aa14.55□□□□□ -0.08
SCAF11-206ENST00000474828 POLR1DQ9Y2S0 133 aa14.55□□□□□ -0.08
SCAF11-206ENST00000474828 RTTNQ86VV8 2226 aa14.55□□□□□ -0.08
SCAF11-206ENST00000474828 CELSR1Q9NYQ6 3014 aa14.55□□□□□ -0.08
SCAF11-206ENST00000474828 SLC22A31A6NKX4 558 aa14.54□□□□□ -0.08
SCAF11-206ENST00000474828 NGFP01138 241 aa14.54□□□□□ -0.08
SCAF11-206ENST00000474828 IGHV3-13P01766 116 aa14.54□□□□□ -0.08
SCAF11-206ENST00000474828 GABRB1P18505 474 aa14.54□□□□□ -0.08
SCAF11-206ENST00000474828 RPS27P42677 84 aaKnown RBP14.54□□□□□ -0.08
SCAF11-206ENST00000474828 PTH2RP49190 550 aa14.54□□□□□ -0.08
SCAF11-206ENST00000474828 RGS6P49758 472 aa14.54□□□□□ -0.08
SCAF11-206ENST00000474828 PPOXP50336 477 aa14.54□□□□□ -0.08
SCAF11-206ENST00000474828 NUDT6P53370 316 aa14.54□□□□□ -0.08
SCAF11-206ENST00000474828 CDC42P60953 191 aa14.54□□□□□ -0.08
SCAF11-206ENST00000474828 TRIP10Q15642 601 aa14.54□□□□□ -0.08
SCAF11-206ENST00000474828 DNM1P46Q6ZS02 220 aa14.54□□□□□ -0.08
SCAF11-206ENST00000474828 RFPL4BQ6ZWI9 263 aa14.54□□□□□ -0.08
SCAF11-206ENST00000474828 DPY19L4Q7Z388 723 aa14.54□□□□□ -0.08
SCAF11-206ENST00000474828 DCXRQ7Z4W1 244 aa14.54□□□□□ -0.08
SCAF11-206ENST00000474828 GID4Q8IVV7 300 aa14.54□□□□□ -0.08
SCAF11-206ENST00000474828 SLC7A6Q92536 515 aa14.54□□□□□ -0.08
SCAF11-206ENST00000474828 ZMYND19Q96E35 227 aaPredicted RBP14.54□□□□□ -0.08
SCAF11-206ENST00000474828 ABHD6Q9BV23 337 aa14.54□□□□□ -0.08
SCAF11-206ENST00000474828 MRPL37Q9BZE1 423 aaKnown RBP14.54□□□□□ -0.08
SCAF11-206ENST00000474828 YIPF3Q9GZM5 350 aa14.54□□□□□ -0.08
SCAF11-206ENST00000474828 FAM118AQ9NWS6 357 aa14.54□□□□□ -0.08
SCAF11-206ENST00000474828 EIF3KQ9UBQ5 218 aaKnown RBP14.54□□□□□ -0.08
SCAF11-206ENST00000474828 PRRC2AP48634 2157 aaKnown RBP14.54□□□□□ -0.08
SCAF11-206ENST00000474828 M0R129 80 aa14.53□□□□□ -0.08
SCAF11-206ENST00000474828 DBHP09172 617 aa14.53□□□□□ -0.08
SCAF11-206ENST00000474828 ACSM4P0C7M7 580 aa14.53□□□□□ -0.08
SCAF11-206ENST00000474828 FAM157BP0CG42 384 aa14.53□□□□□ -0.08
SCAF11-206ENST00000474828 BMP4P12644 408 aa14.53□□□□□ -0.08
SCAF11-206ENST00000474828 ALOX5APP20292 161 aa14.53□□□□□ -0.08
SCAF11-206ENST00000474828 PEX2P28328 305 aa14.53□□□□□ -0.08
SCAF11-206ENST00000474828 OCLNQ16625 522 aa14.53□□□□□ -0.08
SCAF11-206ENST00000474828 KLHL12Q53G59 568 aa14.53□□□□□ -0.08
SCAF11-206ENST00000474828 LCN1P1Q5VSP4 162 aa14.53□□□□□ -0.08
SCAF11-206ENST00000474828 RGS7BPQ6MZT1 257 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-206ENST00000474828 SLC16A9Q7RTY1 509 aa14.53□□□□□ -0.08
SCAF11-206ENST00000474828 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-206ENST00000474828 ERI1Q8IV48 349 aaKnown RBP14.53□□□□□ -0.08
SCAF11-206ENST00000474828 COG8Q96MW5 612 aa14.53□□□□□ -0.08
SCAF11-206ENST00000474828 IL4I1Q96RQ9 567 aa14.53□□□□□ -0.08
SCAF11-206ENST00000474828 SMPD3Q9NY59 655 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-206ENST00000474828 NKX1-2Q9UD57 310 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-206ENST00000474828 LOC100130705A0A1B0GUX0 176 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 ZNF878C9JN71 531 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 SELENOFO60613 162 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 SPARCP09486 303 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 HTR1FP30939 366 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 OPRL1P41146 370 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 ART1P52961 327 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 ERVS71-1P61550 626 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 PPP1CBP62140 327 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 ROM1Q03395 351 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 SLC34A1Q06495 639 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 RIPK1Q13546 671 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 ZIK1Q3SY52 487 aaPredicted RBP14.52□□□□□ -0.09
SCAF11-206ENST00000474828 TMEM255AQ5JRV8 349 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 LPCAT4Q643R3 524 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 VHLLQ6RSH7 139 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 BCDIN3DQ7Z5W3 292 aaKnown RBP14.52□□□□□ -0.09
SCAF11-206ENST00000474828 LRP11Q86VZ4 500 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 OR1J1Q8NGS3 322 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 RHOXF1Q8NHV9 184 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 UBE2FQ969M7 185 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 OTULINQ96BN8 352 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 SLAMF6Q96DU3 332 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 AMELYQ99218 206 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 MNTQ99583 582 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 CACNG6Q9BXT2 260 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 RNPEPL1Q9HAU8 725 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 ADGRL4Q9HBW9 690 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 WARS2Q9UGM6 360 aaKnown RBP14.52□□□□□ -0.09
SCAF11-206ENST00000474828 ITGB1BP2Q9UKP3 347 aa14.52□□□□□ -0.09
SCAF11-206ENST00000474828 ARFGEF3Q5TH69 2177 aa14.51□□□□□ -0.09
SCAF11-206ENST00000474828 ABHD16AO95870 558 aa14.51□□□□□ -0.09
SCAF11-206ENST00000474828 CCNOP22674 350 aa14.51□□□□□ -0.09
SCAF11-206ENST00000474828 SNRPD2P62316 118 aaKnown RBP14.51□□□□□ -0.09
SCAF11-206ENST00000474828 ADARB1P78563 741 aaKnown RBP14.51□□□□□ -0.09
SCAF11-206ENST00000474828 MEDAGQ5VYS4 303 aa14.51□□□□□ -0.09
SCAF11-206ENST00000474828 SHEQ5VZ18 495 aa14.51□□□□□ -0.09
SCAF11-206ENST00000474828 DEGS2Q6QHC5 323 aa14.51□□□□□ -0.09
SCAF11-206ENST00000474828 DRAM2Q6UX65 266 aa14.51□□□□□ -0.09
SCAF11-206ENST00000474828 FBXW12Q6X9E4 464 aa14.51□□□□□ -0.09
SCAF11-206ENST00000474828 PRSS45Q7RTY3 260 aa14.51□□□□□ -0.09
SCAF11-206ENST00000474828 OR6N2Q8NGY6 317 aa14.51□□□□□ -0.09
SCAF11-206ENST00000474828 ABHD4Q8TB40 342 aa14.51□□□□□ -0.09
SCAF11-206ENST00000474828 FAM81AQ8TBF8 368 aa14.51□□□□□ -0.09
SCAF11-206ENST00000474828 SYNPRQ8TBG9 265 aa14.51□□□□□ -0.09
SCAF11-206ENST00000474828 SLC25A40Q8TBP6 338 aa14.51□□□□□ -0.09
SCAF11-206ENST00000474828 KLF14Q8TD94 323 aaPredicted RBP14.51□□□□□ -0.09
SCAF11-206ENST00000474828 APOBEC3DQ96AK3 386 aaPredicted RBP14.51□□□□□ -0.09
SCAF11-206ENST00000474828 TRMT61AQ96FX7 289 aaKnown RBP14.51□□□□□ -0.09
SCAF11-206ENST00000474828 ZNF582Q96NG8 517 aaPredicted RBP14.51□□□□□ -0.09
SCAF11-206ENST00000474828 KCNJ15Q99712 375 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms