RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 HLXQ14774 488 aaPredicted RBP15.67■□□□□ 0.1
COL7A1-209ENST00000474432 SPATS1Q496A3 300 aa15.67■□□□□ 0.1
COL7A1-209ENST00000474432 ZNF362Q5T0B9 420 aaPredicted RBP15.67■□□□□ 0.1
COL7A1-209ENST00000474432 LIPNQ5VXI9 398 aa15.67■□□□□ 0.1
COL7A1-209ENST00000474432 FBXW12Q6X9E4 464 aa15.67■□□□□ 0.1
COL7A1-209ENST00000474432 ZNF620Q6ZNG0 422 aa15.67■□□□□ 0.1
COL7A1-209ENST00000474432 COLCA1Q6ZS62 124 aa15.67■□□□□ 0.1
COL7A1-209ENST00000474432 ZDHHC21Q8IVQ6 265 aa15.67■□□□□ 0.1
COL7A1-209ENST00000474432 ZNF283Q8N7M2 679 aa15.67■□□□□ 0.1
COL7A1-209ENST00000474432 OR2Z1Q8NG97 314 aa15.67■□□□□ 0.1
COL7A1-209ENST00000474432 TIMD4Q96H15 378 aa15.67■□□□□ 0.1
COL7A1-209ENST00000474432 SIGLEC11Q96RL6 698 aa15.67■□□□□ 0.1
COL7A1-209ENST00000474432 DCLRE1CQ96SD1 692 aaKnown RBP15.67■□□□□ 0.1
COL7A1-209ENST00000474432 COQ7Q99807 217 aa15.67■□□□□ 0.1
COL7A1-209ENST00000474432 FN3KQ9H479 309 aa15.67■□□□□ 0.1
COL7A1-209ENST00000474432 LOC105371242A0A075B767 164 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 TCRBV5S2A0A599 114 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 J3QW42 95 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 ZFP36P26651 326 aaKnown RBP15.66■□□□□ 0.1
COL7A1-209ENST00000474432 GGT2P36268 569 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 ZNF770Q6IQ21 691 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-209ENST00000474432 SLC18B1Q6NT16 456 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 CFAP77Q6ZQR2 320 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 ZNF771Q7L3S4 317 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-209ENST00000474432 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-209ENST00000474432 FITM2Q8N6M3 262 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 GJC3Q8NFK1 279 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 SEMA6DQ8NFY4 1073 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 OR4C15Q8NGM1 316 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 GNPDA2Q8TDQ7 276 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 ITLN1Q8WWA0 313 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 ZNRF4Q8WWF5 429 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 MCUR1Q96AQ8 359 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 BTBD10Q9BSF8 475 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 IFT27Q9BW83 186 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 PNRC2Q9NPJ4 139 aaKnown RBP15.66■□□□□ 0.1
COL7A1-209ENST00000474432 RPRD1BQ9NQG5 326 aaKnown RBP15.66■□□□□ 0.1
COL7A1-209ENST00000474432 TMEM106BQ9NUM4 274 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 MRPL22Q9NWU5 206 aaKnown RBP15.66■□□□□ 0.1
COL7A1-209ENST00000474432 PTTG3PQ9NZH4 202 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 LYVE1Q9Y5Y7 322 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 NPTNQ9Y639 398 aa15.66■□□□□ 0.1
COL7A1-209ENST00000474432 TENM1Q9UKZ4 2725 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 DCTN3O75935 186 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 MAGEA2P43356 314 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 CENPAP49450 140 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 SLC3A1Q07837 685 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 OR2T2Q6IF00 324 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 PGM2L1Q6PCE3 622 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 DNM1P34Q6PK57 102 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 C16orf89Q6UX73 402 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 CYP2R1Q6VVX0 501 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 LINC00346Q8IVM7 164 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 SDR9C7Q8NEX9 313 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 OR9Q2Q8NGE9 314 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 COG8Q96MW5 612 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 GAL3ST1Q99999 423 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 PLA2G12AQ9BZM1 189 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 HDHD2Q9H0R4 259 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 EGLN3Q9H6Z9 239 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 ACTR3BQ9P1U1 418 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 IL19Q9UHD0 177 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 OPN4Q9UHM6 478 aa15.65■□□□□ 0.1
COL7A1-209ENST00000474432 A0A1B0GWJ7 208 aa15.64■□□□□ 0.09
COL7A1-209ENST00000474432 BHLHE40O14503 412 aa15.64■□□□□ 0.09
COL7A1-209ENST00000474432 IDH3BO43837 385 aa15.64■□□□□ 0.09
COL7A1-209ENST00000474432 RENP00797 406 aa15.64■□□□□ 0.09
COL7A1-209ENST00000474432 FSHBP01225 129 aa15.64■□□□□ 0.09
COL7A1-209ENST00000474432 PSKH1P11801 424 aa15.64■□□□□ 0.09
COL7A1-209ENST00000474432 RGS6P49758 472 aa15.64■□□□□ 0.09
COL7A1-209ENST00000474432 SLC35F1Q5T1Q4 408 aa15.64■□□□□ 0.09
COL7A1-209ENST00000474432 NAA40Q86UY6 237 aa15.64■□□□□ 0.09
COL7A1-209ENST00000474432 JAZF1Q86VZ6 243 aa15.64■□□□□ 0.09
COL7A1-209ENST00000474432 OR5AS1Q8N127 324 aa15.64■□□□□ 0.09
COL7A1-209ENST00000474432 OR52E2Q8NGJ4 325 aa15.64■□□□□ 0.09
COL7A1-209ENST00000474432 OR8D4Q8NGM9 314 aa15.64■□□□□ 0.09
COL7A1-209ENST00000474432 APOBEC3DQ96AK3 386 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-209ENST00000474432 VNN3Q9NY84 501 aa15.64■□□□□ 0.09
COL7A1-209ENST00000474432 CYB5R1Q9UHQ9 305 aa15.64■□□□□ 0.09
COL7A1-209ENST00000474432 TMCC3Q9ULS5 477 aa15.64■□□□□ 0.09
COL7A1-209ENST00000474432 POLR1DQ9Y2S0 133 aa15.64■□□□□ 0.09
COL7A1-209ENST00000474432 ISPDA4D126 451 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 H0YL77 283 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 MLNRO43193 412 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 SBK2P0C263 348 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 ACSM4P0C7M7 580 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 ANOS1P23352 680 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 IFNGR2P38484 337 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 LCN2P80188 198 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 MS4A2Q01362 244 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.63■□□□□ 0.09
COL7A1-209ENST00000474432 ZMYND11Q15326 602 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 C1QL2Q7Z5L3 287 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 LRRC28Q86X40 367 aaPredicted RBP15.63■□□□□ 0.09
COL7A1-209ENST00000474432 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.63■□□□□ 0.09
COL7A1-209ENST00000474432 OR8G5Q8NG78 346 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 OR10S1Q8NGN2 331 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 MAP6Q96JE9 813 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 OR2V2Q96R30 315 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 C1QTNF5Q9BXJ0 243 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms