RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SYT3Q9BQG1 590 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 COPS4Q9BT78 406 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 CACNG6Q9BXT2 260 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 MRPL37Q9BZE1 423 aaKnown RBP10.69□□□□□ -0.7
DDX56-209ENST00000473924 VCXQ9H320 206 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 PLCE1Q9P212 2302 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 LOC100130705A0A1B0GUX0 176 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 A0A1W2PPW3 197 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 CCDC182A6NF36 153 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 ZNF878C9JN71 531 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 OVOL3O00110 214 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 NGFP01138 241 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 MRPL3P09001 348 aaKnown RBP10.68□□□□□ -0.7
DDX56-209ENST00000473924 PSKH1P11801 424 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 GCH1P30793 250 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 SLC15A1P46059 708 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 PTH2RP49190 550 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 RGS6P49758 472 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 ATP5J2P56134 94 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 TPTEP56180 551 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 KLF3P57682 345 aaPredicted RBP10.68□□□□□ -0.7
DDX56-209ENST00000473924 PPP1CBP62140 327 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 SLC34A1Q06495 639 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 SWI5Q1ZZU3 235 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 MST1LQ2TV78 715 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 ZNF718Q3SXZ3 478 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 SPATA46Q5T0L3 261 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 AADACL4Q5VUY2 407 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 C11orf71Q6IPW1 123 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 RFPL4BQ6ZWI9 263 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 SPATC1Q76KD6 591 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 SLC16A9Q7RTY1 509 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 SYNPRQ8TBG9 265 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 IPCEF1Q8WWN9 437 aaPredicted RBP10.68□□□□□ -0.7
DDX56-209ENST00000473924 RFKQ969G6 155 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 COG8Q96MW5 612 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 CNN2Q99439 309 aaKnown RBP10.68□□□□□ -0.7
DDX56-209ENST00000473924 FOXC2Q99958 501 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 VRK1Q99986 396 aaPredicted RBP10.68□□□□□ -0.7
DDX56-209ENST00000473924 ABHD6Q9BV23 337 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 DYNLRB1Q9NP97 96 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 PNRC2Q9NPJ4 139 aaKnown RBP10.68□□□□□ -0.7
DDX56-209ENST00000473924 TBCCD1Q9NVR7 557 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 FAM118AQ9NWS6 357 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 DNAJC27Q9NZQ0 273 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 LAMP5Q9UJQ1 280 aa10.68□□□□□ -0.7
DDX56-209ENST00000473924 FBXO9Q9UK97 447 aaPredicted RBP10.68□□□□□ -0.7
DDX56-209ENST00000473924 M0R135 149 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 CASQ2O14958 399 aaPredicted RBP10.67□□□□□ -0.7
DDX56-209ENST00000473924 ICMTO60725 284 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 LYNP07948 512 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 HSD11B1P28845 292 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 ATP6V1E1P36543 226 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 SLC6A9P48067 706 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 EVX1P49640 407 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 NUDT6P53370 316 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 MSMPQ1L6U9 139 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 OGFRL1Q5TC84 451 aaPredicted RBP10.67□□□□□ -0.7
DDX56-209ENST00000473924 LRP11Q86VZ4 500 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.67□□□□□ -0.7
DDX56-209ENST00000473924 LRRC75A-AS1Q8N1F1 130 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 ZNF454Q8N9F8 522 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 OR5L1Q8NGL2 311 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 OR10S1Q8NGN2 331 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 OTOSQ8NHW6 89 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 SLC25A40Q8TBP6 338 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 ST7LQ8TDW4 575 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 CYGBQ8WWM9 190 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 UBE2FQ969M7 185 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 APOBEC3DQ96AK3 386 aaPredicted RBP10.67□□□□□ -0.7
DDX56-209ENST00000473924 ZNF799Q96GE5 643 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 ZNF582Q96NG8 517 aaPredicted RBP10.67□□□□□ -0.7
DDX56-209ENST00000473924 GSX2Q9BZM3 304 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 OR2J1Q9GZK6 312 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 YIPF3Q9GZM5 350 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 RNPEPL1Q9HAU8 725 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 DDX28Q9NUL7 540 aaKnown RBP10.67□□□□□ -0.7
DDX56-209ENST00000473924 ZNF701Q9NV72 531 aaPredicted RBP10.67□□□□□ -0.7
DDX56-209ENST00000473924 NKX1-2Q9UD57 310 aaPredicted RBP10.67□□□□□ -0.7
DDX56-209ENST00000473924 WARS2Q9UGM6 360 aaKnown RBP10.67□□□□□ -0.7
DDX56-209ENST00000473924 GPR160Q9UJ42 338 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 CSMD2Q7Z408 3487 aa10.67□□□□□ -0.7
DDX56-209ENST00000473924 TMEM129A0AVI4 362 aa10.66□□□□□ -0.7
DDX56-209ENST00000473924 H7C417 338 aa10.66□□□□□ -0.7
DDX56-209ENST00000473924 J3QW42 95 aa10.66□□□□□ -0.7
DDX56-209ENST00000473924 M0R233 179 aa10.66□□□□□ -0.7
DDX56-209ENST00000473924 MPZL2O60487 215 aa10.66□□□□□ -0.7
DDX56-209ENST00000473924 CLPTM1O96005 669 aa10.66□□□□□ -0.7
DDX56-209ENST00000473924 LCATP04180 440 aa10.66□□□□□ -0.7
DDX56-209ENST00000473924 ERCC1P07992 297 aaPredicted RBP10.66□□□□□ -0.7
DDX56-209ENST00000473924 H2BFMP0C1H6 154 aa10.66□□□□□ -0.7
DDX56-209ENST00000473924 ACSM4P0C7M7 580 aa10.66□□□□□ -0.7
DDX56-209ENST00000473924 ZNF250P15622 560 aa10.66□□□□□ -0.7
DDX56-209ENST00000473924 TUBG1P23258 451 aa10.66□□□□□ -0.7
DDX56-209ENST00000473924 HTR1FP30939 366 aa10.66□□□□□ -0.7
DDX56-209ENST00000473924 PRKXP51817 358 aa10.66□□□□□ -0.7
DDX56-209ENST00000473924 HCCSP53701 268 aa10.66□□□□□ -0.7
DDX56-209ENST00000473924 SNRPGP62308 76 aaKnown RBP10.66□□□□□ -0.7
DDX56-209ENST00000473924 GRB2P62993 217 aaKnown RBP10.66□□□□□ -0.7
DDX56-209ENST00000473924 POU4F2Q12837 409 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms