RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 ZNF675Q8TD23 568 aa3.26□□□□□ -1.89
COL9A1-206ENST00000470652 GPR151Q8TDV0 419 aa3.26□□□□□ -1.89
COL9A1-206ENST00000470652 KIAA1143Q96AT1 154 aaPredicted RBP3.26□□□□□ -1.89
COL9A1-206ENST00000470652 TAMM41Q96BW9 452 aa3.26□□□□□ -1.89
COL9A1-206ENST00000470652 NEURL3Q96EH8 262 aa3.26□□□□□ -1.89
COL9A1-206ENST00000470652 ZBED6CLQ96FA7 236 aaPredicted RBP3.26□□□□□ -1.89
COL9A1-206ENST00000470652 RBM18Q96H35 190 aaKnown RBP3.26□□□□□ -1.89
COL9A1-206ENST00000470652 ITCHQ96J02 903 aa3.26□□□□□ -1.89
COL9A1-206ENST00000470652 MS4A4EQ96PG1 132 aa3.26□□□□□ -1.89
COL9A1-206ENST00000470652 RASL10BQ96S79 203 aa3.26□□□□□ -1.89
COL9A1-206ENST00000470652 CCNL2Q96S94 520 aaPredicted RBP3.26□□□□□ -1.89
COL9A1-206ENST00000470652 THTPAQ9BU02 230 aa3.26□□□□□ -1.89
COL9A1-206ENST00000470652 THUMPD3Q9BV44 507 aaKnown RBP3.26□□□□□ -1.89
COL9A1-206ENST00000470652 ING2Q9H160 280 aa3.26□□□□□ -1.89
COL9A1-206ENST00000470652 GNB4Q9HAV0 340 aa3.26□□□□□ -1.89
COL9A1-206ENST00000470652 PROK2Q9HC23 129 aa3.26□□□□□ -1.89
COL9A1-206ENST00000470652 CTPS2Q9NRF8 586 aa3.26□□□□□ -1.89
COL9A1-206ENST00000470652 DEPPQ9NTK1 212 aa3.26□□□□□ -1.89
COL9A1-206ENST00000470652 C14orf105Q9NVL8 296 aa3.26□□□□□ -1.89
COL9A1-206ENST00000470652 FAM120CQ9NX05 1096 aaKnown RBP3.26□□□□□ -1.89
COL9A1-206ENST00000470652 MS4A12Q9NXJ0 267 aa3.26□□□□□ -1.89
COL9A1-206ENST00000470652 ADA2Q9NZK5 511 aa3.26□□□□□ -1.89
COL9A1-206ENST00000470652 BTNL2Q9UIR0 455 aa3.26□□□□□ -1.89
COL9A1-206ENST00000470652 LEF1Q9UJU2 399 aaPredicted RBP3.26□□□□□ -1.89
COL9A1-206ENST00000470652 KALRNO60229 2985 aa3.26□□□□□ -1.89
COL9A1-206ENST00000470652 ZFYVE26Q68DK2 2539 aa3.26□□□□□ -1.89
COL9A1-206ENST00000470652 SHANK1Q9Y566 2161 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 ZGRF1Q86YA3 2104 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 A0A087WZ39 114 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 ACOD1A6NK06 481 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 A8MVM7 634 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 F8VVB4 439 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 F8VWA3 439 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 TLX2O43763 284 aaPredicted RBP3.25□□□□□ -1.89
COL9A1-206ENST00000470652 PLOD3O60568 738 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 TSPAN2O60636 221 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 REM1O75628 298 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 KCNK2O95069 426 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 UTS2O95399 124 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 H6PDO95479 791 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 OPN1LWP04000 364 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 ALOX5P09917 674 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 TFPTP0C1Z6 253 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 GKN3PP0CG01 181 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 KLK2P20151 261 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 CALB2P22676 271 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 EDNRAP25101 427 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 CD82P27701 267 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 PRDX6P30041 224 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 MPIP34949 423 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 KRT20P35900 424 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 YAP1P46937 504 aaKnown RBP3.25□□□□□ -1.89
COL9A1-206ENST00000470652 OR1E2P47887 323 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 MLF1P58340 268 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 DSTNP60981 165 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 GABPB1Q06547 395 aaPredicted RBP3.25□□□□□ -1.89
COL9A1-206ENST00000470652 PLCXD2Q0VAA5 305 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 CAMK2DQ13557 499 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 SCARB2Q14108 478 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 SERTAD2Q14140 314 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 TOMM34Q15785 309 aaPredicted RBP3.25□□□□□ -1.89
COL9A1-206ENST00000470652 C3AR1Q16581 482 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 CYP51A1Q16850 503 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 FAM106AQ4KMX7 169 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 HIGD2BQ4VC39 106 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 GPAT3Q53EU6 434 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 LRRC23Q53EV4 343 aaPredicted RBP3.25□□□□□ -1.89
COL9A1-206ENST00000470652 PIGGQ5H8A4 983 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 KRBOX4Q5JUW0 171 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 DCST2Q5T1A1 773 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 PDZK1Q5T2W1 519 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 ANXA8L1Q5VT79 327 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 CBLN3Q6UW01 205 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 HSDL2Q6YN16 418 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 ZNF836Q6ZNA1 936 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 ASRGL1Q7L266 308 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 SH2D6Q7Z4S9 175 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 TSEN54Q7Z6J9 526 aaKnown RBP3.25□□□□□ -1.89
COL9A1-206ENST00000470652 MARCH3Q86UD3 253 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 RAB43Q86YS6 212 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 PHC2Q8IXK0 858 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 PGAM4Q8N0Y7 254 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 COX18Q8N8Q8 333 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 MORN4Q8NDC4 146 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 SFXN5Q8TD22 340 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 HGDQ93099 445 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 SLCO4A1Q96BD0 722 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 ROPN1LQ96C74 230 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 VMP1Q96GC9 406 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 SH3YL1Q96HL8 342 aaPredicted RBP3.25□□□□□ -1.89
COL9A1-206ENST00000470652 SDF2Q99470 211 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 ATF6BQ99941 703 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 CHCHD5Q9BSY4 110 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 KATNB1Q9BVA0 655 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 DEFB126Q9BYW3 111 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 SLC38A1Q9H2H9 487 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 KAT8Q9H7Z6 458 aaKnown RBP3.25□□□□□ -1.89
COL9A1-206ENST00000470652 EFCAB1Q9HAE3 211 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 VNN3Q9NY84 501 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 ABCD2Q9UBJ2 740 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms