RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 P2RX2Q9UBL9 471 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 FBXL17Q9UF56 701 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 GPR132Q9UNW8 380 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 IGSF9BQ9UPX0 1349 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 CHST2Q9Y4C5 530 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 FLVCR1Q9Y5Y0 555 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 COX11Q9Y6N1 276 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 CDH10Q9Y6N8 788 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 MAP3K4Q9Y6R4 1608 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 V9GYH0 126 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 PDE4DIPQ5VU43 2346 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 MARF1Q9Y4F3 1742 aaKnown RBP4.58□□□□□ -1.68
COL3A1-205ENST00000470167 C1orf167Q5SNV9 1468 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 IQCMA0A1B0GVH7 501 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 A0A1W2PQF6 199 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 A0A1W2PR80 420 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 ZC3H12DA2A288 527 aaKnown RBP4.58□□□□□ -1.68
COL3A1-205ENST00000470167 TMEM150BA6NC51 233 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 AQP7P3A6NL99 342 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 HIDE1A8MVS5 230 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 EFCAB9A8MZ26 197 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 RFXAPO00287 272 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 DSCR3O14972 297 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 NDUFS4O43181 175 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 AIREO43918 545 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 GNG7O60262 68 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 YIF1AO95070 293 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 CLIC3O95833 236 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 SERPINA7P05543 415 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 RAB40ALP0C0E4 278 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 TMEM253P0C7T8 217 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 C1QTNF9P0C862 333 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 EBLN1P0CF75 366 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF35P13682 527 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 IL7RP16871 459 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 FBLN1P23142 703 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 ADORA2BP29275 332 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 GKP32189 559 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 TAF6P49848 677 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 ASCL1P50553 236 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 TAS2R43P59537 309 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 LILRA4P59901 499 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 TPI1P60174 286 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 RPS27AP62979 156 aaKnown RBP4.58□□□□□ -1.68
COL3A1-205ENST00000470167 GNG3P63215 75 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 BTN3A2P78410 334 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 RUNX1Q01196 453 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 HGFACQ04756 655 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 MZT1Q08AG7 82 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 HYAL1Q12794 435 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 PPP1R8Q12972 351 aaKnown RBP4.58□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF234Q14588 700 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 NPY5RQ15761 445 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 SRSF7Q16629 238 aaKnown RBP eCLIP4.58□□□□□ -1.68
COL3A1-205ENST00000470167 ASTE1Q2TB18 679 aaPredicted RBP4.58□□□□□ -1.68
COL3A1-205ENST00000470167 CCSMST1Q4G0I0 132 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 TMEM128Q5BJH2 165 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 ALG10BQ5I7T1 473 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 TPTE2P1Q5T6R2 138 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 PODNL1Q6PEZ8 512 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 CD200R1LQ6Q8B3 271 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 WDR74Q6RFH5 385 aaPredicted RBP4.58□□□□□ -1.68
COL3A1-205ENST00000470167 TMPRSS11AQ6ZMR5 421 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 GLT6D1Q7Z4J2 308 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 MRGPRGQ86SM5 289 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 SLC47A2Q86VL8 602 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 RNF130Q86XS8 419 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 IGDCC3Q8IVU1 814 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 UEVLDQ8IX04 471 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 PNPLA1Q8N8W4 532 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 AMER3Q8N944 861 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 TMEM116Q8NCL8 245 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 BEST4Q8NFU0 473 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 OR4K5Q8NGD3 323 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 OR9I1Q8NGQ6 314 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 LMO3Q8TAP4 145 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 FCGR1BQ92637 280 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 LHX4Q969G2 390 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 MOAP1Q96BY2 351 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 SEH1LQ96EE3 360 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 PIK3IP1Q96FE7 263 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 AURKBQ96GD4 344 aaPredicted RBP4.58□□□□□ -1.68
COL3A1-205ENST00000470167 MIEN1Q9BRT3 115 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 MCRIP2Q9BUT9 160 aaKnown RBP4.58□□□□□ -1.68
COL3A1-205ENST00000470167 LINC00470Q9BZP3 86 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 SIRPDQ9H106 197 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 MED28Q9H204 178 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 CDC42EP4Q9H3Q1 356 aaKnown RBP4.58□□□□□ -1.68
COL3A1-205ENST00000470167 SRD5A3Q9H8P0 318 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 ACKR4Q9NPB9 350 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 PRSS16Q9NQE7 514 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 UBQLN4Q9NRR5 601 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 SLC7A10Q9NS82 523 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 DOK5Q9P104 306 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 NLKQ9UBE8 527 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 PILRBQ9UKJ0 227 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 OSGIN2Q9Y236 505 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 UBIAD1Q9Y5Z9 338 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 RFNGQ9Y644 331 aa4.58□□□□□ -1.68
COL3A1-205ENST00000470167 MYH9P35579 1960 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms