RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 OR10K2Q6IF99 312 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 PAPD4Q6PIY7 484 aaKnown RBP12.19□□□□□ -0.46
BRCA1-209ENST00000470026 LRFN4Q6PJG9 635 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 TFAP2EQ6VUC0 442 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 SLC25A42Q86VD7 318 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 KCNRGQ8N5I3 272 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 JAGN1Q8N5M9 183 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 MRGPRFQ96AM1 343 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 NPAS1Q99742 590 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 NUDT16L1Q9BRJ7 211 aaKnown RBP12.19□□□□□ -0.46
BRCA1-209ENST00000470026 TPSD1Q9BZJ3 242 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 MKL2Q9ULH7 1088 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 LOC101059948A0A1B0GTJ6 334 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 TMEM235A6NFC5 223 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 DISC1C4P0D8 188 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 D6RAR5 112 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 RLN2P04090 185 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 ZNF28P17035 718 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 APOBEC1P41238 236 aaKnown RBP12.18□□□□□ -0.46
BRCA1-209ENST00000470026 OR1D5P58170 312 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 NXPH1P58417 271 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 GPR85P60893 370 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 RNF4P78317 190 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 LANCL3Q6ZV70 420 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 TMED4Q7Z7H5 227 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 ZNF546Q86UE3 836 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 PLXDC1Q8IUK5 500 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 BEST3Q8N1M1 668 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 KDM8Q8N371 416 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 ZDHHC22Q8N966 263 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 ARL5BQ96KC2 179 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 PRRT1Q99946 306 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 DNTTIP1Q9H147 329 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 PCED1AQ9H1Q7 454 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 CNTD2Q9H8S5 307 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 RASL12Q9NYN1 266 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 COQ3Q9NZJ6 369 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 PISDQ9UG56 409 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 ZNF230Q9UIE0 474 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-209ENST00000470026 TNFSF18Q9UNG2 199 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 VSIG4Q9Y279 399 aa12.18□□□□□ -0.46
BRCA1-209ENST00000470026 OR5H14A6NHG9 310 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 NPIPA5E9PKD4 350 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 SDC3O75056 442 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 TTRP02766 147 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 BDKRB2P30411 391 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 GSK3AP49840 483 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 UNC119Q13432 240 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 JMJD6Q6NYC1 403 aaPredicted RBP12.17□□□□□ -0.46
BRCA1-209ENST00000470026 COX15Q7KZN9 410 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 ZNF584Q8IVC4 421 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 LINC00346Q8IVM7 164 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 DEFB119Q8N690 84 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 ST8SIA2Q92186 375 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 UQCC2Q9BRT2 126 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 TGIF2Q9GZN2 237 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 CHST11Q9NPF2 352 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 CYB5R1Q9UHQ9 305 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 GPN3Q9UHW5 284 aaPredicted RBP12.17□□□□□ -0.46
BRCA1-209ENST00000470026 NPIPA1Q9UND3 350 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 ADAMTS20P59510 1910 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 SZT2Q5T011 3432 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 METTL21EPA6NDL7 271 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 P2RY10O00398 339 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 CDK2AP1O14519 115 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 OR2F2O95006 317 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 BPNT1O95861 308 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 CD34P28906 385 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 CD96P40200 585 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 ARL4DP49703 201 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 HSF1Q00613 529 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 C17orf67Q0P5P2 114 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 OR2F1Q13607 317 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 C11orf87Q6NUJ2 197 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 FAHD2BQ6P2I3 314 aaPredicted RBP12.17□□□□□ -0.46
BRCA1-209ENST00000470026 LYG2Q86SG7 212 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 FJX1Q86VR8 437 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 KMT5CQ86Y97 462 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 PRSS58Q8IYP2 241 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 CADM4Q8NFZ8 388 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 ZNF501Q96CX3 271 aaPredicted RBP12.17□□□□□ -0.46
BRCA1-209ENST00000470026 FAHD2AQ96GK7 314 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 ZMAT3Q9HA38 289 aaKnown RBP12.17□□□□□ -0.46
BRCA1-209ENST00000470026 BARX1Q9HBU1 254 aaPredicted RBP12.17□□□□□ -0.46
BRCA1-209ENST00000470026 SLC22A11Q9NSA0 550 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 CTSFQ9UBX1 484 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 FBXL2Q9UKC9 423 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 FBXO4Q9UKT5 387 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 PLEKHA6Q9Y2H5 1048 aa12.17□□□□□ -0.46
BRCA1-209ENST00000470026 A0A1W2PNV4 684 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 ZNF354AO60765 605 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-209ENST00000470026 PIAS2O75928 621 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 H2BFMP0C1H6 154 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 FOSL2P15408 326 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 OR7A5Q15622 319 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-209ENST00000470026 ACBD4Q8NC06 268 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 APCDD1LQ8NCL9 501 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 NFAM1Q8NET5 270 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-209ENST00000470026 OR4S1Q8NGB4 309 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms