RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 RHCEP18577 417 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 NUDT2P50583 147 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 FXYD6P3P58550 94 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 BTG1P62324 171 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 ZNF154Q13106 437 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 KCNMB1Q16558 191 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 MEP1BQ16820 701 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 TMEM155Q4W5P6 130 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 KLF17Q5JT82 389 aaPredicted RBP11.17□□□□□ -0.62
CPSF4-210ENST00000469897 DPY19L2P2Q6ZN68 376 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 BCL6BQ8N143 479 aaPredicted RBP11.17□□□□□ -0.62
CPSF4-210ENST00000469897 SIGLECL1Q8N7X8 197 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 ZNF420Q8TAQ5 688 aaPredicted RBP11.17□□□□□ -0.62
CPSF4-210ENST00000469897 RSRC1Q96IZ7 334 aaKnown RBP11.17□□□□□ -0.62
CPSF4-210ENST00000469897 C7orf34Q96L11 122 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 SIGLEC11Q96RL6 698 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 C1QTNF5Q9BXJ0 243 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 WDR76Q9H967 626 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 GCM1Q9NP62 436 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 ZNF69Q9UC07 566 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 NUP50Q9UKX7 468 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 AURKCQ9UQB9 309 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 NDUFAB1O14561 156 aa11.16□□□□□ -0.62
CPSF4-210ENST00000469897 SPRY1O43609 319 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-210ENST00000469897 WNT2P09544 360 aa11.16□□□□□ -0.62
CPSF4-210ENST00000469897 ZNF12P17014 697 aa11.16□□□□□ -0.62
CPSF4-210ENST00000469897 MDH1P40925 334 aaKnown RBP11.16□□□□□ -0.62
CPSF4-210ENST00000469897 RPS6KA3P51812 740 aa11.16□□□□□ -0.62
CPSF4-210ENST00000469897 UBA52P62987 128 aaKnown RBP11.16□□□□□ -0.62
CPSF4-210ENST00000469897 RSPO1Q2MKA7 263 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-210ENST00000469897 AWAT1Q58HT5 328 aa11.16□□□□□ -0.62
CPSF4-210ENST00000469897 SLC27A4Q6P1M0 643 aa11.16□□□□□ -0.62
CPSF4-210ENST00000469897 CORO6Q6QEF8 472 aa11.16□□□□□ -0.62
CPSF4-210ENST00000469897 RBMS3Q6XE24 437 aaKnown RBP11.16□□□□□ -0.62
CPSF4-210ENST00000469897 HACD2Q6Y1H2 254 aa11.16□□□□□ -0.62
CPSF4-210ENST00000469897 RNF148Q8N7C7 305 aa11.16□□□□□ -0.62
CPSF4-210ENST00000469897 FAM86B1Q8N7N1 296 aa11.16□□□□□ -0.62
CPSF4-210ENST00000469897 GJC3Q8NFK1 279 aa11.16□□□□□ -0.62
CPSF4-210ENST00000469897 OR8G5Q8NG78 346 aa11.16□□□□□ -0.62
CPSF4-210ENST00000469897 OR5L1Q8NGL2 311 aa11.16□□□□□ -0.62
CPSF4-210ENST00000469897 ZNF582Q96NG8 517 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-210ENST00000469897 ERMAPQ96PL5 475 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-210ENST00000469897 DUX5Q96PT3 197 aa11.16□□□□□ -0.62
CPSF4-210ENST00000469897 GPX7Q96SL4 187 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-210ENST00000469897 TMEM165Q9HC07 324 aa11.16□□□□□ -0.62
CPSF4-210ENST00000469897 DCAF13Q9NV06 445 aaKnown RBP11.16□□□□□ -0.62
CPSF4-210ENST00000469897 B9D1Q9UPM9 204 aa11.16□□□□□ -0.62
CPSF4-210ENST00000469897 POLR1DQ9Y2S0 133 aa11.16□□□□□ -0.62
CPSF4-210ENST00000469897 POLR3KQ9Y2Y1 108 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-210ENST00000469897 INSIG2Q9Y5U4 225 aa11.16□□□□□ -0.62
CPSF4-210ENST00000469897 PPP1R3DO95685 299 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 TXNDC12O95881 172 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 CYB5R3P00387 301 aaPredicted RBP11.15□□□□□ -0.62
CPSF4-210ENST00000469897 CD80P33681 288 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 MDH2P40926 338 aaKnown RBP11.15□□□□□ -0.62
CPSF4-210ENST00000469897 RGS6P49758 472 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 HIST1H3AP68431 136 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 KRT72Q14CN4 511 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 RFX4Q33E94 735 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 ARMCX4Q5H9R4 360 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 HIST2H3PS2Q5TEC6 136 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 SMARCD3Q6STE5 483 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 FBXW12Q6X9E4 464 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 HIST2H3AQ71DI3 136 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 ADCK1Q86TW2 530 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 OR6V1Q8N148 313 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 BHLHE23Q8NDY6 225 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 OR10AD1Q8NGE0 317 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 OR13G1Q8NGZ3 307 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 POP5Q969H6 163 aaKnown RBP11.15□□□□□ -0.62
CPSF4-210ENST00000469897 APOBEC3DQ96AK3 386 aaPredicted RBP11.15□□□□□ -0.62
CPSF4-210ENST00000469897 MEGF10Q96KG7 1140 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 NMNAT3Q96T66 252 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 ELAC2Q9BQ52 826 aaKnown RBP11.15□□□□□ -0.62
CPSF4-210ENST00000469897 ADA2Q9NZK5 511 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 ABCD2Q9UBJ2 740 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 LHFPL6Q9Y693 200 aa11.15□□□□□ -0.62
CPSF4-210ENST00000469897 IGHV3OR16-10A0A075B7F0 116 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 CEACAM18A8MTB9 384 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 F5H0A9 414 aaPredicted RBP11.14□□□□□ -0.63
CPSF4-210ENST00000469897 F5H5P2 479 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 GMNNO75496 209 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 HLA-DPB1P04440 258 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 CRABP1P29762 137 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 PMELP40967 661 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 MMP16P51512 607 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 PRSS12P56730 875 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 PAX8Q06710 450 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 ESCO2Q56NI9 601 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 HSP90B2PQ58FF3 399 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 LEG1Q6P5S2 330 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 DNM1P34Q6PK57 102 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 NAA40Q86UY6 237 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 LINC00346Q8IVM7 164 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 OR4K13Q8NH42 304 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 SGMS2Q8NHU3 365 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 CMTM5Q96DZ9 223 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 PYURFQ96I23 114 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 COQ7Q99807 217 aa11.14□□□□□ -0.63
CPSF4-210ENST00000469897 FUZQ9BT04 418 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms