RNA–Protein interactions for RNA: ENST00000468915.5

SLC13A3-209, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5

Gene SLC13A3, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-209ENST00000468915 NANOGP1Q8N7R0 232 aa12.89□□□□□ -0.35
SLC13A3-209ENST00000468915 NANOS1Q8WY41 292 aaKnown RBP12.89□□□□□ -0.35
SLC13A3-209ENST00000468915 MYDGFQ969H8 173 aa12.89□□□□□ -0.35
SLC13A3-209ENST00000468915 ATF6BQ99941 703 aa12.89□□□□□ -0.35
SLC13A3-209ENST00000468915 HDHD2Q9H0R4 259 aa12.89□□□□□ -0.35
SLC13A3-209ENST00000468915 RNF121Q9H920 327 aa12.89□□□□□ -0.35
SLC13A3-209ENST00000468915 BLOC1S6Q9UL45 172 aa12.89□□□□□ -0.35
SLC13A3-209ENST00000468915 EXOSC1Q9Y3B2 195 aaKnown RBP12.89□□□□□ -0.35
SLC13A3-209ENST00000468915 LRP12Q9Y561 859 aa12.89□□□□□ -0.35
SLC13A3-209ENST00000468915 ICE1Q9Y2F5 2266 aa12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 ZNF878C9JN71 531 aa12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 TNFAIP8O95379 198 aa12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 COX5BP10606 129 aa12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 CCL2P13500 99 aa12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 LOXP28300 417 aaPredicted RBP12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 MAP2K4P45985 399 aa12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 EGR3Q06889 387 aa12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 TP53I3Q53FA7 332 aa12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 XAF1Q6GPH4 301 aa12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 ZNF679Q8IYX0 411 aa12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 ASB17Q8WXJ9 295 aa12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 PELI1Q96FA3 418 aa12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 ZC3HAV1LQ96H79 300 aaKnown RBP12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 COQ7Q99807 217 aa12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 KCNN2Q9H2S1 579 aa12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 ELOVL3Q9HB03 270 aa12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 CENPMQ9NSP4 180 aa12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 ATPIF1Q9UII2 106 aa12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 KLF2Q9Y5W3 355 aaPredicted RBP12.88□□□□□ -0.35
SLC13A3-209ENST00000468915 TMEM129A0AVI4 362 aa12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 DPRXA6NFQ7 191 aa12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 E9PI62 339 aa12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 PHYHO14832 338 aa12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 PNPP00491 289 aa12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 ZNF35P13682 527 aa12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 HOXC12P31275 282 aa12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 ZNF83P51522 516 aa12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 EMX1Q04741 257 aaPredicted RBP12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 C3orf36Q3SXR2 165 aa12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 LIPNQ5VXI9 398 aa12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 ZNF773Q6PK81 442 aa12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 DEGS2Q6QHC5 323 aa12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 DMRTC2Q8IXT2 367 aaPredicted RBP12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 SYS1Q8N2H4 156 aa12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 MUCL1Q96DR8 90 aa12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 OR5M11Q96RB7 305 aa12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 MED18Q9BUE0 208 aa12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 ACOXLQ9NUZ1 547 aa12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 PLCE1Q9P212 2302 aa12.87□□□□□ -0.35
SLC13A3-209ENST00000468915 METTL15A6NJ78 407 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 MRPS14O60783 128 aaKnown RBP12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 SULT1C4O75897 302 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 ACSM4P0C7M7 580 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 EEF1B2P24534 225 aaKnown RBP12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 STOMP27105 288 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 CALCRP30988 508 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 WNT5AP41221 380 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 HTR5AP47898 357 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 KCTD18Q6PI47 426 aaPredicted RBP12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 WFDC8Q8IUA0 241 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 OR52N1Q8NH53 320 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 SPRYD4Q8WW59 207 aaPredicted RBP12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 RORBQ92753 470 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 LRRC46Q96FV0 321 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 C4orf36Q96KX1 117 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 KCNJ15Q99712 375 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 CRIM1Q9NZV1 1036 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 ZNF319Q9P2F9 582 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 CAB39Q9Y376 341 aaPredicted RBP12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 GRIP1Q9Y3R0 1128 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 SIRT4Q9Y6E7 314 aaPredicted RBP12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 DOPEY2Q9Y3R5 2298 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 TUBAL3A6NHL2 446 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 DEFB108AA8MXU0 73 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 ICMTO60725 284 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 ZNF254O75437 659 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 EPXP11678 715 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 PRKXP51817 358 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 NANOS3P60323 173 aaKnown RBP12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 MFGE8Q08431 387 aaPredicted RBP12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 SPOCK1Q08629 439 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 ECH1Q13011 328 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 TBCEQ15813 527 aaPredicted RBP12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 ALKBH2Q6NS38 261 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 COLCA1Q6ZS62 124 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 KRT77Q7Z794 578 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 SLC30A7Q8NEW0 376 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 SNX33Q8WV41 574 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 PPP1R14AQ96A00 147 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 DACH2Q96NX9 599 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 ACOT13Q9NPJ3 140 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 FAM206AQ9NX38 181 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 IKZF2Q9UKS7 526 aa12.86□□□□□ -0.35
SLC13A3-209ENST00000468915 DCHS2Q6V1P9 2916 aa12.85□□□□□ -0.35
SLC13A3-209ENST00000468915 ABCA4P78363 2273 aa12.85□□□□□ -0.35
SLC13A3-209ENST00000468915 PKDREJQ9NTG1 2253 aa12.85□□□□□ -0.35
SLC13A3-209ENST00000468915 ROS1P08922 2347 aa12.85□□□□□ -0.35
SLC13A3-209ENST00000468915 IGHV2OR16-5A0A0B4J2B6 119 aa12.85□□□□□ -0.35
SLC13A3-209ENST00000468915 F5H5K5 113 aa12.85□□□□□ -0.35
SLC13A3-209ENST00000468915 J3QLW9 94 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms