RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 TXNL4BQ9NX01 149 aaKnown RBP7.3□□□□□ -1.24
BRCA1-208ENST00000468300 TAS2R3Q9NYW6 316 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 EXTL2Q9UBQ6 330 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 ZNF175Q9Y473 711 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 CEP295Q9C0D2 2601 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 IGKV3D-15A0A087WSY6 115 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 K7ENP7 123 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 TAF4O00268 1085 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 NDUFA2O43678 99 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 AQP8O94778 261 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 VAMP5O95183 116 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 IGHG1P01857 330 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 MT-ND5P03915 603 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 INHBBP09529 407 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 CPN1P15169 458 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 CELP19835 753 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 ANOS1P23352 680 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 CDAP32320 146 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 GPR50Q13585 617 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 FAM76BQ5HYJ3 339 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 C10orf128Q5T292 105 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 INO80CQ6PI98 192 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-208ENST00000468300 TMPRSS11AQ6ZMR5 421 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 ADGRE4PQ86SQ3 457 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 AKR7LQ8NHP1 331 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 TBC1D15Q8TC07 691 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 RGP1Q92546 391 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-208ENST00000468300 NSMAFQ92636 917 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 MARC2Q969Z3 335 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 CPNE4Q96A23 557 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-208ENST00000468300 ZNF775Q96BV0 537 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-208ENST00000468300 FAM122AQ96E09 287 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 NAA11Q9BSU3 229 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-208ENST00000468300 GON7Q9BXV9 100 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 BARHL1Q9BZE3 327 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 OR10A4Q9H209 315 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 SLCO1C1Q9NYB5 712 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 DMRT1Q9Y5R6 373 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 PRRC2CQ9Y520 2896 aaKnown RBP7.3□□□□□ -1.24
BRCA1-208ENST00000468300 A0A1B0GTH9 108 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 LINC00587B1AMM8 73 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 HRGP04196 525 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 TUBG1P23258 451 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 FGF9P31371 208 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-208ENST00000468300 ROM1Q03395 351 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 SRYQ05066 204 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 KCNMB1Q16558 191 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 Q6ZS92 163 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 FGD2Q7Z6J4 655 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 OR6N2Q8NGY6 317 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 FNDC8Q8TC99 324 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 C11orf40Q8WZ69 217 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 UFD1Q92890 307 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 NXF2Q9GZY0 626 aaKnown RBP7.3□□□□□ -1.24
BRCA1-208ENST00000468300 SAV1Q9H4B6 383 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-208ENST00000468300 TUBG2Q9NRH3 451 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 GLTPQ9NZD2 209 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 LHFPL6Q9Y693 200 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 ARHGAP21Q5T5U3 1957 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 CNTRLQ7Z7A1 2325 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 LOC390937A0A1W2PQ73 354 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 ACTL6AO96019 429 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 OR8G3PP0DMU2 310 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 RPS19P39019 145 aaKnown RBP7.29□□□□□ -1.24
BRCA1-208ENST00000468300 PSMB10P40306 273 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 ENTPD1P49961 510 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 CCR9P51686 369 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 GNG2P59768 71 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 ACTA2P62736 377 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 ACTG2P63267 376 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 GLO1Q04760 184 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 CDK5R1Q15078 307 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 FCRLAQ7L513 359 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 NR2C2APQ86WQ0 139 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 GLB1L2Q8IW92 636 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 PRSS35Q8N3Z0 413 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 PNRC2Q9NPJ4 139 aaKnown RBP7.29□□□□□ -1.24
BRCA1-208ENST00000468300 FRRS1LQ9P0K9 344 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 SPTBN4Q9H254 2564 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 TRAV17A0A0B4J275 112 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 TRDV1A0A1B0GX56 115 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 ZNF879B4DU55 563 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 ZNF670-ZNF695F2Z2N8 137 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 KHDRBS3O75525 346 aaKnown RBP7.29□□□□□ -1.24
BRCA1-208ENST00000468300 PNPP00491 289 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 PLATP00750 562 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 CD1AP06126 327 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 LAP3P28838 519 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 CLRN1P58418 232 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 SIRPAP78324 504 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 ADAM8P78325 824 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 EGR3Q06889 387 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 HES5Q5TA89 166 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 OR13C5Q8NGS8 318 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 NANOS1Q8WY41 292 aaKnown RBP7.29□□□□□ -1.24
BRCA1-208ENST00000468300 THRSPQ92748 146 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 ABHD6Q9BV23 337 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 TMED9Q9BVK6 235 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 DCSTAMPQ9H295 470 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 NUDT15Q9NV35 164 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms